Alkalicella caledoniensis: HYG86_05035
Help
Entry
HYG86_05035 CDS
T07204
Symbol
tnpB
Name
(GenBank) IS200/IS605 family element transposase accessory protein TnpB
KO
K07496
putative transposase
Organism
acae
Alkalicella caledoniensis
Brite
KEGG Orthology (KO) [BR:
acae00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
HYG86_05035 (tnpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
DUF6693
zf-piccolo
HhH-GPD
DUF7575
dCache_1
Zn_ribbon_IS1595
zf_DPOE_2
Motif
Other DBs
NCBI-ProteinID:
QNO14179
UniProt:
A0A7G9W667
LinkDB
All DBs
Position
complement(1018831..1019958)
Genome browser
AA seq
375 aa
AA seq
DB search
MLKAYKYRIYPNEMQKKQLAKTFGCARFVYNYYLAEKIKLYKDKQESLSKIDCNNHLNRE
LKKELIWLKEVDKFALTNSIYNLDTAYQHFFRRVKQGKDKTGFPRFKSRHSNRLSYTTNF
TNNNIKIDFSDNKIKLPKLKWIESKVHREFDGKIKSANIVQNTSGRYFVSILVDTETKDL
PLPKVDKTIGLDLGISNFLIDSDGNTISNPKILYKHERKLAKLQRQLAKKQKTSNNRNKM
RIKVARLHEKISDTRRDFLHKLSKQIINENQVIVSEDLNVRGMVRNHKLAKAISDVSWSE
FTRQLEYKANWYCRTYVKIDRLFPSSQLCSHCGFKNTKTKSLSVREWTCDNCGNEHDRDI
NASRNILQEGLRMLA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaaggcatacaagtatagaatatatccaaatgaaatgcaaaaaaagcaactagct
aaaacctttgggtgtgctagatttgtgtataactactacttagccgaaaaaataaagctg
tataaagacaaacaagaatctctgtctaaaatagactgtaacaaccatctaaacagagaa
ctaaagaaagaactgatatggcttaaagaagtagataagttcgccttaaccaattctatt
tacaacctggatactgcttatcagcatttctttagaagagttaaacaaggaaaagataag
acaggatttcctagatttaaaagtagacatagcaatagattaagctacacaactaatttt
acaaataacaacataaaaattgatttctcagataataaaattaagttacctaaacttaaa
tggatagaatccaaagttcacagagaatttgatggaaaaatcaagtctgcaaacatagtt
caaaacacaagcggaagatattttgtgagtattcttgtggatacagaaacaaaagatcta
ccactaccgaaagtagataagactatagggttagacttaggaatcagtaattttctgata
gacagtgatggaaatacaatttctaatccaaaaatcctatataaacatgaaagaaaactg
gcaaaactacaaaggcaattagccaagaaacaaaaaactagtaacaatagaaacaagatg
agaatcaaggtggccaggcttcacgaaaagatatcagataccaggagggatttcttacat
aaactgtctaagcaaattatcaacgaaaaccaagttatagttagtgaagacttaaatgta
agaggaatggtaaggaatcataaactagctaaagcaatatcagatgtgtcatggtcagaa
ttcactagacaactagaatataaagctaactggtattgcagaacttatgtcaagatagac
aggttattcccatctagtcagctatgctctcattgtggatttaagaacacaaaaaccaag
agtctatcagttagagaatggacttgtgataattgcggaaatgaacatgatagagatata
aatgccagtaggaatatactgcaagaaggcttgcgaatgttagcctaa
DBGET
integrated database retrieval system
