Alkalicella caledoniensis: HYG86_05335
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Entry
HYG86_05335 CDS
T07204
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K07483
transposase
Organism
acae
Alkalicella caledoniensis
Brite
KEGG Orthology (KO) [BR:
acae00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
HYG86_05335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_28
HTH_Tnp_1
HTH_29
HTH_23
HTH_Tnp_ISL3
HTH_32
SpoIIID
DUF1804
HTH_17
HTH_psq
LZ_Tnp_IS481
HTH_7
Sacchrp_dh_NADP
BrkDBD
DUF746
DUF641
DUF4817
Motif
Other DBs
NCBI-ProteinID:
QNO14234
UniProt:
A0A7G9W8Y2
LinkDB
All DBs
Position
complement(1080400..1081083)
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AA seq
227 aa
AA seq
DB search
MGRKSKFSPEEKLEYVLMCIEGKNSVSHAAKLIGVSKDTMRRWVSNYMSLGVDGLTTSAK
NTSHSSNAKELAIKEYLSGKGSLHDICFQYGIRSTGILHTWVMKYNSHEKLKSSGTGGVS
IMTKGRKTHFDERVEIVKYCIENKCNYVETAQKFNVSYQQVNSWTNKYLKKGIEALQDKR
GKRKSEDDMSEMDKLKAQNKLLEAEIRQKQMEIDFLKKLKEIERGRF
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaaaagtaaattctcaccagaagaaaagttagagtatgttcttatgtgtata
gaaggaaaaaattcagttagccatgcagctaagttaatcggtgtcagtaaagataccatg
aggagatgggtcagtaattatatgtcgttgggtgttgatgggttgactactagtgcaaag
aatactagccattcttcaaatgcaaaggaattagcgataaaggaatacctttctggtaag
ggttctttgcatgatatatgttttcaatatggaatacgctctacagggatacttcataca
tgggttatgaagtataatagtcatgagaaattaaaatcttctggtactggaggagtatct
atcatgactaaaggaagaaagacccattttgatgaaagagtagaaatagtaaagtactgt
attgagaataaatgcaactatgttgaaacagcacagaagtttaatgtatcttaccagcag
gttaattcatggactaataaatacctaaaaaaaggtatagaagcccttcaagacaagcga
ggcaaaagaaagtcagaagatgacatgtctgaaatggacaaacttaaagcccaaaacaaa
ctacttgaagctgaaattcgccagaagcaaatggagatagattttttaaaaaagttgaaa
gaaatagaaagggggcggttttaa
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