Alkalicella caledoniensis: HYG86_07110
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Entry
HYG86_07110 CDS
T07204
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
acae
Alkalicella caledoniensis
Brite
KEGG Orthology (KO) [BR:
acae00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
HYG86_07110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_N
HHH_3
Tex_central_region
S1
HHH_9
S1_RRP5
HHH_7
YqgF
Spt6_S1
T2SSK
DUF4164
CvfB_2nd
RNase_II_C_S1
HHH_6
OB_RRP5_4th
Lipoprotein_20
Motif
Other DBs
NCBI-ProteinID:
QNO14566
UniProt:
A0A7G9W7A4
LinkDB
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Position
complement(1456492..1458633)
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AA seq
713 aa
AA seq
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MDIIKLVSKQTKVSEKQVQQTVALLEEGNTVPFIARYRKEMTGGLTEEDIRLVQETYDYQ
KGLQERKEEVHRLIEEQGKLTQELAEKITKATKLQQLEDIYRPFRPKRNTRASIAKELGL
EPLAQMLLEQAVSWEELAQPFVNEKVEDIEKALQGAKDIIAEMITDLPENREFSRGFVFD
RGTIETVAVDKEAQSPYEMYYEYSEPIKKLPPHRVMAMDRAEKEKFIKVSLILDKDSLVR
DLWNRNLSKAPTTNEQQLKDALEDGVSRLLLPSVERDIRRGLTDNAQEAACKVFTANLKS
LLLQPPTRNIVVLGLDPAYRTGCKLAVVDSTGKVLDISVIYPTPPRNQKEEGKKKILEFV
DKYGITVIAIGNGTASRESAEFVAEFIGERENLSYTIVDEAGASVYSASPLAKEEYPDLD
VAERSAISIARRLQDPLAELVRIPPQSIGVGQYQHDVDQKRLASLLGGVVEDCVNNVGAD
LNTASPSLLSYIAGIKPAQAKAIVKVREELGAFKARKDILKVPRLGKATYEQCAGFLRIK
EGVEPLDSTSVHPESYEAAEKLIEILGYTKEELAKRGGLPGIRGKVSENEQRDLAGKLGI
GVPTLVDILTSLEKPGLDPRESLPKPLFLSGVLKLEDLHEGMIVKGTVRNVVDFGAFVDI
GVKEAGLIHISEMSEKFIKHPLEVVTVGDTVEARVIGVDPGKRRIALSLKGVI
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtggacattataaaactagtatcaaagcagacaaaggttagtgaaaagcaagttcaacaa
acagtagctcttttagaggaggggaacacagtcccttttattgcccgttatcgtaaagaa
atgactggtggattaacagaagaggacatccgtttagttcaagagacctatgactatcaa
aaaggtcttcaagagcgtaaagaagaagtacatagacttatagaagaacaagggaagtta
acacaggagctagctgaaaagataacaaaggcaaccaaactacagcaactagaagatata
tataggccctttagaccaaaaagaaacacaagggctagtatagcaaaagagctagggtta
gagccactggcacaaatgcttcttgaacaagcagtgtcttgggaagaactggctcaacca
tttgttaacgaaaaagtggaagatatagaaaaagcccttcaaggtgctaaagatataata
gcagagatgataacagaccttcctgagaacagggagttttccaggggctttgtctttgat
aggggaaccatagaaaccgtagcagttgataaagaagctcaatccccctatgaaatgtat
tatgagtatagtgagcctatcaaaaagttaccaccccatagggtcatggcaatggatagg
gcagaaaaagagaaattcatcaaagtatccctaatacttgataaagactccttagtaagg
gatctttggaatagaaatttatcaaaggcacctacaacaaatgaacagcagctaaaagat
gcactagaagatggtgtaagtcgtttgcttctcccatcggtggagagggatatcagacgc
ggtcttacagacaatgctcaagaagcagcctgcaaggtatttacagctaatttaaaatcc
ttactactgcaacctccaacgagaaacattgttgtactaggtcttgatccagcctacaga
acaggctgtaagcttgcagttgtagatagtactggtaaagtattggatataagtgtcata
tatcctacacctcctagaaaccaaaaggaggaaggtaaaaagaagatactagaatttgtt
gataaatatggtattactgtaattgccataggcaatggtacagctagtcgtgaaagtgct
gagttcgtagcagagttcataggtgagagagaaaatttatcttacaccatagtggatgaa
gcaggagccagtgtttactctgcatcaccactggccaaggaagaatatcctgatttagac
gtggcagaaagaagtgccatatccatagcgagaaggctacaagatcctttggcagagctt
gtaaggattcctccacaatctattggagtagggcaatatcaacatgatgtggatcaaaaa
aggttggcgtcactattaggtggagtagtggaagattgcgttaataacgtgggtgcagac
ttaaacacagcaagtccctcactactaagttatattgcaggcattaaacctgctcaagct
aaagccatagtaaaagtccgtgaagaactgggggcatttaaagctagaaaggatattttg
aaggttcccagacttggaaaagcaacatatgagcaatgtgctggtttcttaaggattaaa
gaaggtgtggaaccacttgattctacatcggttcatccagagtcctatgaggcagctgaa
aaacttatagagatactaggttacacaaaagaagaattagcaaaaaggggaggcttacca
ggaataaggggtaaggtttctgaaaatgagcaacgtgacttagccggaaaacttggaata
ggtgtacctactttagtagacatacttacatctttagagaagcctggccttgacccccgt
gaaagcttgcctaagcctctgtttttatctggagtacttaaactagaggatttacatgag
ggaatgattgtaaagggaactgtaagaaatgtagtagacttcggagcctttgtggatatt
ggtgtgaaggaagctggattaatccacatatcagagatgtcagagaaatttattaaacat
cctttggaagtagtaactgtgggagatacagttgaagcgagagttataggggtagaccca
ggaaaaagaagaatagccttgagtttaaaaggagttatctaa
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