Alkalicella caledoniensis: HYG86_11155
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Entry
HYG86_11155 CDS
T07204
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
acae
Alkalicella caledoniensis
Pathway
acae03420
Nucleotide excision repair
acae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HYG86_11155 (pcrA)
03430 Mismatch repair
HYG86_11155 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acae03400
]
HYG86_11155 (pcrA)
Enzymes [BR:
acae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYG86_11155 (pcrA)
DNA repair and recombination proteins [BR:
acae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYG86_11155 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HYG86_11155 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
YccV-like
DEAD
Phage_terminase
ResIII
Motif
Other DBs
NCBI-ProteinID:
QNO15280
UniProt:
A0A7G9W9B8
LinkDB
All DBs
Position
2260104..2262260
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AA seq
718 aa
AA seq
DB search
MDITKNLNPEQRKAAECTEGPLLIIAGAGSGKTRVLTHRIAYILEKGLAKPWQILAITFT
NKAAAEMFERVDNMVYGAKDMWISTFHSACVKILRREATRVGFDTNFNIYDTSDQTKLIK
DCLKELNIDDKKFPPKTFIGAISKAKNMLISPVDYAPKDHFESLVQNVYKLYQRRLQNNN
AMDFDDLIFETVKLFRFNPDVLEKYQERFKYIMVDEYQDTNHSQYVLVNFLAQGHRNLCV
VGDDDQSIYLFRGADVSNILDFEKDYPEATVVKLEQNYRSTKTIIAAANDVIKQNEGRKG
KNLWTDNDEGEKIVVHQAIDQYQEAEFIIGEIEKHVSHGKNYKDMAILFRTNALSRVLEE
VLVRRGIPYVIYGATEFYKRREIKDVLAYLKALVNPEDNLSIARIINVPRRGIGDTTIDK
YLAYAEEASLSLYQVLKNHSDVVPRSSKKVQDFVALIEQLRSMAEYLTVSELLDEVINRT
GYQSMLQNENTDEARMRLENIQELSTVTQEFDNNSEGGLEEFVQEISLNTDTESVNADGN
VVKLLTLHSAKGLEFPIIFIAGAEEKIFPHIRSFEEPIEMQEERRLCYVGITRAMEKLYF
TCAQSRSLYGRTDRNPVSRFLDEIKAELLDNNSPKGYQVKELFTKSPSLSNNIYAKPVKQ
NINIPYQVGMVVEHKKFGQGIIIGIQPLGDDQSVTIDFQTAGNKKLMASFAPLKVIEN
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggatataacaaaaaatttaaacccagaacaaagaaaagccgctgaatgtacagaaggg
ccacttcttataattgcaggagcaggaagtggtaaaacacgagtattaacccacagaata
gcctatatacttgaaaagggattggcaaaaccttggcagatacttgccattacatttaca
aacaaagctgctgcagagatgtttgaaagggtagataacatggtctatggtgctaaagat
atgtggatatctacctttcactctgcctgtgtaaagattttaagaagggaagcaacaagg
gtaggttttgatactaatttcaatatctatgataccagcgaccaaacaaagcttatcaaa
gactgtctcaaggaattgaacatagacgataaaaagtttccacctaaaacctttataggc
gccatatcaaaggctaagaatatgttgatttctccagttgactatgctcccaaggaccat
tttgagagcttagtacaaaatgtgtacaagctttaccaaagaaggttacagaacaataat
gccatggattttgatgatctgatttttgagacagtaaagttatttaggtttaaccccgat
gtactagaaaaatatcaagaaagatttaagtacatcatggtagatgagtaccaagataca
aaccatagtcaatacgtactggttaactttttagcacaagggcataggaatctgtgtgta
gttggtgacgatgaccagtcaatctaccttttcaggggagcagatgtttcaaatatatta
gattttgaaaaagattatcctgaagccactgtagttaaactcgagcaaaactatcgatcc
actaagaccattattgcagctgcaaatgatgttataaagcaaaacgaaggtcgtaaaggt
aaaaacctatggactgataatgacgaaggtgaaaaaatcgtagttcaccaagcaattgac
caataccaagaagcagaatttataattggagagatagagaagcatgtaagccacggtaaa
aactataaagatatggctattttatttaggacaaatgccctatcccgtgtacttgaggaa
gtattagtccgtagaggaataccatatgtaatatatggagcaacggagttctacaaaaga
agagagataaaagatgtcctggcgtatttaaaagctttggttaacccagaagacaattta
agtatagcccgtattataaacgtgccccgtaggggaatcggtgacactaccattgacaaa
tatctagcatatgcagaagaggctagtttgtccctataccaggtgttaaaaaaccacagt
gatgttgtacctagaagtagcaaaaaagtccaagattttgtagcactcattgaacagctt
agatctatggctgaatatttaacggtgtcagagctgctagatgaagtaataaaccgtaca
ggctatcaatcaatgcttcaaaacgaaaataccgatgaagcccgtatgagactggaaaac
atccaagagctttccactgtaacccaagaatttgataataacagtgaaggcggactggag
gaatttgtgcaagagatatcccttaacacagataccgaaagtgtaaatgccgacggaaat
gtagttaaactattgactctccatagtgcaaaaggtcttgagttccctattatctttatt
gcaggagctgaagaaaagattttccctcatataaggtcatttgaagaaccaattgagatg
caagaggaaagaagattatgttatgtgggtataaccagggccatggagaagctatacttc
acctgtgctcaaagcaggagtctatatggacgtacagaccgtaatccagtttctagattc
ttagatgagattaaagcggagcttttagataataatagccctaaaggatatcaagtaaaa
gagctattcactaaaagtccttctttatcaaataacatatatgcaaagcctgttaaacaa
aatatcaacatcccataccaagttggtatggttgtagaacataaaaagtttggacagggt
ataataataggtatacagccactaggggatgaccaatcagtaacaattgatttccaaact
gcaggaaacaaaaaactaatggcaagttttgcacccctaaaagtaatagagaattag
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