Alkalicella caledoniensis: HYG86_12240
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Entry
HYG86_12240 CDS
T07204
Name
(GenBank) topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
acae
Alkalicella caledoniensis
Brite
KEGG Orthology (KO) [BR:
acae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acae03032
]
HYG86_12240
03400 DNA repair and recombination proteins [BR:
acae03400
]
HYG86_12240
Enzymes [BR:
acae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HYG86_12240
DNA replication proteins [BR:
acae03032
]
Prokaryotic type
DNA Topoisomerases
HYG86_12240
DNA repair and recombination proteins [BR:
acae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYG86_12240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Lzipper-MIP1
Motif
Other DBs
NCBI-ProteinID:
QNO15481
UniProt:
A0A7G9W9W9
LinkDB
All DBs
Position
2478860..2481052
Genome browser
AA seq
730 aa
AA seq
DB search
MSKLTHLNVIDTLEKNYMPYSMSVIVSRALPEIDGLKPSHRKLLYTMYKMGLLKGAKTKS
ANIVGQTMKLNPHGDGAIYETMVRLTRGNEALLHPLVDSKGNFGKNYSKEMAYAAPRYTE
AKLDGICEEFFNDINKNTVDFMPNYDNTMQEPKLLPTTFPNILANPNMGIAVGMASSICS
FNLKEVCQTTIEFLKNEEVDILEYLKAPDFSSGGQLILNKRELKAIYETGRGSFSLRGKY
VYDQKNNCIDIYQIPYTTTTEAIIDKIIELVKGGKIKEINDIRDETDKEGLKITLDLKRN
TDAEHLMNRLFKMTTLQDTFSCNFNILIHGKPMVLGVKQIIKEWTSFRIGCIKRQLAHDI
EQKTQRLHLLKGLEKILLDIDRAVQIVRDTKKDKEVVPNLMKGFEIDEIQAEFIADIKLR
NFNQEYILNKTKDIKALEKDIKNLESTLKNEEKVKKIIITELEQVAEKYGKPRKTEIIEE
KHIEVVTVENLIEDYNVKFFITSENYLKKIPLTSLRSSSNGQKLKDDDFITQEIEGTNKS
ELLLFSNKAVVYKVRAYELEDKKTSSLGDYLKNLLNLADDERIIYMAVTDDYTGYMLFFY
KNGKCAKIPLESYQTKTNRKQLANAYSDDEKLIHIEHIKEEKELVAASSIKKVLVFNTGE
ISPKTTRNSVGVQVLKPKKGSSLTMIKELDKVNFNNIDYYRGKVAAIGTFLKRDDSLEKV
EELTFEGLDE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagctaacccaccttaatgtaatagatacactagaaaaaaactatatgccctac
tcaatgagtgttattgtatctagggcactacctgaaatagatggactaaagccatctcac
cgcaagctcttatataccatgtataaaatgggtctccttaaaggagcaaaaaccaagtct
gcaaatattgtaggacaaaccatgaagcttaacccccatggtgacggagctatatacgaa
acaatggtacgtcttactcgaggtaatgaagcactactacatccattggtggacagtaag
ggtaacttcggtaaaaactactctaaagagatggcatatgcagcaccgaggtatactgaa
gcaaaactagatgggatttgtgaagaattcttcaacgatatcaataaaaacaccgttgat
tttatgcccaactacgataacaccatgcaagaaccaaagctactacccacaaccttcccc
aatattttagctaaccctaatatgggtatagctgtaggtatggctagctccatatgcagc
ttcaacttaaaggaagtttgtcaaacaacaattgagttccttaagaacgaagaagttgat
atacttgagtatctaaaagcacctgatttttcttcaggtggtcaactaatactcaacaaa
agggaactaaaagccatatacgaaacaggaagaggaagtttctccctaaggggtaagtat
gtatacgatcaaaagaataactgtatagacatataccagataccctatacaacaaccaca
gaagcaataattgataaaattattgagctagttaagggtgggaaaataaaggaaataaat
gacattcgtgatgaaacagataaagaaggccttaagataaccttagatcttaaacgaaac
accgatgcagagcacttgatgaataggctatttaaaatgacaaccctgcaagataccttt
agctgtaatttcaatatcttaatccatggtaaaccaatggtactaggggtaaaacaaatt
ataaaagaatggacaagctttagaatagggtgtataaaaagacagcttgcccatgatata
gaacaaaaaactcaaaggttacacttgcttaaaggtttagaaaaaatccttttagatata
gacagagcagtacagatcgtaagggataccaagaaggataaagaggtagtgccaaacctt
atgaagggttttgaaattgatgaaattcaagctgaatttatagcagatatcaagctgcgt
aatttcaaccaagaatatatcttaaacaaaacaaaagatataaaagcccttgaaaaggat
ataaagaatctcgagtctacgctgaaaaacgaggaaaaagtaaagaaaataataatcact
gaactagagcaagtagccgaaaaatatggtaaaccccgtaaaactgaaataatagaggaa
aaacatatagaggtagttactgtggaaaatcttatagaagattacaatgtaaaattcttt
ataaccagtgaaaactatcttaaaaagattcccctaacatcactaaggagtagcagtaat
ggccaaaagctaaaggacgacgatttcataactcaagaaatagaaggaactaacaaatca
gagctactgctattttccaacaaggccgttgtttataaggttagagcatatgaattggaa
gataaaaaaacaagcagcttaggggattacctgaaaaatttattaaacctagctgatgac
gaaagaataatttacatggctgtaacagatgactatactggatatatgctcttcttctac
aaaaacgggaaatgcgccaagatacctttagaaagttaccaaacaaaaacaaacaggaag
cagctagcaaatgcttattcagatgatgaaaaactcatacacatagaacacatcaaagag
gaaaaagaactagtggcagctagtagtattaaaaaggtattagtatttaacaccggggaa
attagtccgaaaaccactagaaattctgttggagtgcaggtgctaaaacctaaaaaaggt
agctcactgacaatgattaaagaactggacaaggttaactttaacaatatagattactat
agaggaaaggttgccgccataggaacttttctgaaaagagatgactccttagaaaaagtg
gaagagttgacatttgaaggattagatgaataa
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