Alkalicella caledoniensis: HYG86_13115
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Entry
HYG86_13115 CDS
T07204
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acae
Alkalicella caledoniensis
Pathway
acae03030
DNA replication
acae03430
Mismatch repair
acae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYG86_13115
03430 Mismatch repair
HYG86_13115
03440 Homologous recombination
HYG86_13115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acae03032
]
HYG86_13115
03400 DNA repair and recombination proteins [BR:
acae03400
]
HYG86_13115
Enzymes [BR:
acae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYG86_13115
DNA replication proteins [BR:
acae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYG86_13115
DNA repair and recombination proteins [BR:
acae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYG86_13115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QNO15648
UniProt:
A0A7G9WAD6
LinkDB
All DBs
Position
2661941..2665387
Genome browser
AA seq
1148 aa
AA seq
DB search
MENFVHLHVHTEYSLLDGAAKIKDVVAKAKELGQPAIAITDHGTMYGVIDFYKECKKQGV
KPIIGCEVYVAAGSRFSKEGRRDDNSYHLVLLAKDNEGYKNLMKLVSLGYTEGFYYKPRV
DMELLQKYSHGLICLSACLGGEIPQYILQNRNEEALECTQKLLSFFGRDNFYMELQDHGL
MEQKQVNAKLIEIANKLDIQMVVTNDIHYTSRVDSGPHDVLLCIQTAKNIDETGRMKFPN
DEFYMKSRGELEHSFAHQKKALDNTVDIANKCNVDFDFDTTHLPQYPVPEGETLDSYLEK
LCVEGIKYRYSDIKPQILERLDMELSVIKNMGYSGYFLIVWDFIKFARENDILVGPGRGS
AAGSIVAYSLGITNIDPLKYDLLFERFLNPERVSMPDIDIDFCYERREEVINYVVEKYGE
DKVAQIITFGTMAARAVVRDVGRALGIPYSDVDKIAKLIPMELNMTIDKALKVEPTLKLL
YNEDETIKKLLDVSLSLEGMPRHSSTHAAGVVISKEPLTEYVPLQTVENGVVTQFPMGTL
EELGLLKMDFLGLRTLTIINNAVKIIESTHNKKIDIDTVSYDDEKTYNLLSEGKTLGVFQ
LESSGMRNVLRELKPTKFEEIIAVVALYRPGPMEQIPTFIKSKHKQIPISYPHEKVKSVL
EETYGIMVYQEQIMRVASDLAGFSLGESDILRRAIGKKKSEVLAEQRKIFMEGCLKNGLD
EKLAEHVYDLIVKFADYGFNKSHAAAYAVLAYQTAYLKANYPTEFLAAMLTGVMGSSDKV
ALYIDDCKNLNIQILPPDINESLKNFTVVDVEKIRFGLLAVKNVGANIIDDIIKERQKNG
PFKTMDDFVSRIYNLNRRVLESLIKAGAFDTLNSNRAQLLSCIDMIINYGESIRREKESG
QMSLFDIIADTNEQELVLPDLPAFSSKDQLALEKETLGLYISGHPLNDYLDIYTKGVINT
LELKELPDNQRVKIAGTVSSCKKIFTKAGKPMAFIELEDMYGVVEVVVFTDQYERHLDKL
ISDEPIIVLGRVSLKEEEDPKIVCQEIYGITEDFRLYKKREKPSSNLFVKEEVAAVDMPK
KIFLKLVFQEELIAKLNRVIEIAHGDSEVFFYISDKGKVIKAHTKVNVTETLLDCFGELV
GKENVKVT
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggagaattttgtacacctacatgttcatactgaatacagcttgcttgatggtgcagct
aaaattaaggatgtggttgcaaaggctaaagaattaggacaacctgccatagcaataacg
gaccatgggacaatgtacggagtcattgatttttataaggagtgtaaaaagcaaggggta
aagcctataataggctgtgaagtatatgtagctgcagggagtcgtttttccaaagaaggg
cgaagagacgataacagttatcacctagtacttttggcaaaagacaatgaagggtacaaa
aatttgatgaagttggtatccttaggctatacagagggattttattataaaccacgggta
gatatggaactattacaaaaatatagccatggcttaatttgcctctctgcatgtttaggt
ggggaaatcccccaatatattttgcaaaatagaaatgaagaagcattggaatgtactcaa
aaacttctaagcttttttggtagggataatttctatatggagttgcaagaccatggtctc
atggagcaaaaacaggttaacgcaaaactcatagaaattgcaaataagctagatatccag
atggttgttaccaatgatatacattatacgtcccgtgttgacagtggaccccatgatgta
cttctttgtattcagaccgctaaaaatatcgacgaaaccggtcgtatgaagtttcccaat
gatgaattctatatgaaatcaaggggtgagcttgagcatagcttcgcccatcaaaaaaaa
gcattagataacaccgttgatatagcaaataaatgcaacgtagactttgattttgacaca
actcacttgccacaatatccggttccagaaggagaaaccttagactcatacctagaaaag
ttatgtgtagaaggcattaaatatagatatagtgatattaagccacaaatacttgaacga
ttggatatggaactaagtgttattaaaaacatgggctatagtggttacttcttgatcgtt
tgggattttataaaattcgcacgggaaaatgacatactagtgggtccaggccgtggttct
gctgcaggaagtattgttgcatatagtttagggattaccaacatagacccattaaaatac
gacttgctttttgaaagatttcttaaccctgaaagggtatctatgcccgatatagatatt
gacttttgttatgagcgtcgcgaggaagttataaattatgttgtggaaaaatacggagaa
gataaagtagctcagattataacatttggtaccatggcagctagagccgttgtgagagac
gtggggagggctctaggtataccctactcagacgttgataagatagccaaactaatcccc
atggagctaaacatgaccatagacaaggccttgaaggtagagccaacattaaagttgcta
tacaatgaagatgagaccataaagaagctactagacgtatccctttctttggaaggtatg
ccacgtcactcatctacacacgctgcgggtgttgttatatcaaaggaacctttgacagaa
tacgtaccccttcagactgtggaaaacggtgtggtaacccagttccccatggggacttta
gaagaactaggccttttgaaaatggacttcttaggtttacgtacattgaccataataaat
aatgcagtaaaaatcatagaaagtacccacaataaaaaaatagatatagatactgtatcc
tatgacgatgaaaagacatataacctactttcagaagggaagacactaggagtattccaa
ctggaaagtagtggtatgagaaatgttttaagggagctaaagcctactaaatttgaagaa
ataatagctgttgtggccctttatagaccaggccctatggagcagattccaacatttatt
aaaagtaagcataagcaaatacccattagctatccccatgagaaggttaaaagtgtactt
gaagaaacctatggaattatggtataccaagaacagattatgagggttgcatctgactta
gctggattttcactgggtgaatcagatattctacgtagggcaatcggtaaaaagaaaagt
gaagttcttgctgaacaacgtaaaatattcatggaaggttgcttgaaaaacgggcttgac
gaaaaactcgcagagcatgtttatgaccttattgttaaatttgctgactatggttttaac
aagtcccatgctgcggcatatgcagttcttgcctatcaaacagcatatctaaaagcaaac
tatcccactgaatttttagctgccatgttaacaggtgttatgggttcttctgataaagtt
gcattatatatagatgactgtaagaacttaaacattcagatactgccacctgatatcaat
gaaagtttaaaaaactttacagttgtagatgtagagaagataaggtttggcttattggct
gttaaaaatgtaggtgctaatataattgatgatattataaaggaaagacaaaaaaacgga
ccatttaaaacaatggacgattttgtttcaaggatctataacttaaacagaagggtttta
gaaagtttaattaaggcaggtgcctttgatacactaaactctaacagagcacaactatta
agctgcatagacatgataataaattatggggaaagtatccgtcgtgaaaaagagagtggg
caaatgtctctatttgatattatagctgatacaaatgagcaagaactagttctgccagac
ctacctgcatttagctcaaaagatcagcttgccctagaaaaagaaacattgggactatat
ataagtggacaccccctaaatgactatcttgatatatatacaaaaggtgtaattaacacc
ttagaactaaaagagctccccgataatcaaagggttaaaatcgcaggtacagtttcctca
tgcaaaaagatttttactaaggcaggaaaacccatggcctttattgaactagaggatatg
tatggtgttgttgaggttgtagtatttacagatcagtacgaaagacatttggacaagctt
attagtgatgaaccaataattgtcctaggtcgggtatccctgaaggaagaagaggatcct
aaaatagtatgtcaagaaatatacggtataacagaagattttaggctgtacaagaaaagg
gaaaaacctagtagtaatctttttgtgaaagaggaagtagctgctgttgacatgccaaag
aaaattttcttaaagttagtctttcaggaagaattgattgctaaattaaatagagtgatc
gaaattgcccatggagatagtgaagtgtttttctacatctcagataaaggaaaagtaatt
aaggcccatactaaagttaatgttacagaaacacttcttgactgttttggggaactagtg
ggcaaagaaaatgtaaaggtaacatag
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