Alkalicella caledoniensis: HYG86_15245
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Entry
HYG86_15245 CDS
T07204
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acae
Alkalicella caledoniensis
Pathway
acae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYG86_15245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acae03019
]
HYG86_15245
03009 Ribosome biogenesis [BR:
acae03009
]
HYG86_15245
Enzymes [BR:
acae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HYG86_15245
Messenger RNA biogenesis [BR:
acae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HYG86_15245
Ribosome biogenesis [BR:
acae03009
]
Prokaryotic type
rRNA helicases
HYG86_15245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
DUF7090
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QNO16024
UniProt:
A0A7G9WBG2
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All DBs
Position
3129959..3131458
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AA seq
499 aa
AA seq
DB search
MKTFNDFELKGSILRAIQEMGFEEPTPIQGEAIPVVLEGRDLIGLAQTGTGKTAAFGLPM
LNSFDPNSGFIQGLILCPTRELAIQVAEELGKLGKFTGNKILPIYGGQDIGRQIRALKQR
PSIVVGTPGRVIDHINRKTLRIDQLKMAVLDEADEMLDMGFLEDIETILSETPLEKQTLL
FSATMPKPIEKLADKFLQNPHRISVVPKQTTAPQIAQYYIELNEHQKFDALCRLLDIEGS
TSAIIFGRTKRRVDQLADALNKRGYQAEGLHGDLSQAQRDTVMRKFRSNQVELLVATDVA
ARGLDVSGVTHVFNFDLPQNSDSYVHRIGRTGRAGNIGKAYTFATFREMGHLRYIESTVK
TKIQKLPIPTSTQAIEGKQRIAVDKIVSLINDVDLTEYTGTAKSLIEEYDAVNLVAATIK
LLSRETVETEINLTPEPPVHSKKNQGSGQKKSGYGKGRDNRDNRDRYRGQRREGAKSSKD
SGGYKGKKDNRDYRGPKKK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacatttaatgattttgagttaaaaggtagtattttaagagctatacaagaaatg
gggtttgaagagcccacacccattcaaggagaagctatacccgttgttctagaaggaagg
gacttaataggacttgcccaaacaggaactggtaaaacagcagcctttggtttgcctatg
ttaaacagctttgatccaaattcaggatttattcaaggtcttattctttgccctacaagg
gaacttgcaatccaagttgctgaagagcttggcaagcttgggaaattcactgggaacaaa
atacttcctatttacggagggcaagacattggaaggcagattagagcattaaagcaaagg
ccatccattgtagtaggtacacctggaagggtaattgaccatataaatagaaagaccttg
agaatagaccaattaaaaatggctgttcttgatgaagcagatgaaatgctagacatgggc
tttttagaggatattgagacaatcctaagtgaaaccccactggagaaacaaacactttta
ttctccgcaacaatgcctaaacctattgaaaaacttgctgataagtttttacaaaacccc
catagaatttctgtggttccaaaacagacaacagctccacagattgcacaatactatatt
gaattaaacgaacaccaaaaatttgatgctttatgtagattgttggatatcgaaggctct
acttcagccattatttttggtagaacaaaaagacgtgttgatcaactggctgatgctcta
aataaaagaggttaccaggcagaagggctacatggtgacttaagtcaggcacaaagagat
acagtaatgagaaaatttagaagcaatcaagtagaattattagttgcaacagacgtggct
gccaggggacttgatgtttcaggtgtaacccatgtatttaactttgacctgccacaaaat
tcagatagttatgtacacagaattgggcgtacaggaagggcaggaaacattggaaaggca
tacacatttgcaactttcagagaaatgggccacctacgctacattgaatcaactgtaaaa
actaaaattcaaaaattacctatacctacatcaacgcaagctattgaaggcaagcaacga
atcgcagtagacaaaattgttagtctgataaatgatgttgatttgactgagtacacaggt
acagctaaatcacttattgaagagtatgatgctgtaaatctagtagcagctactataaaa
cttttatcaagagaaacagtagaaactgagattaaccttactcctgaacctccagttcat
agcaaaaagaaccaaggatctggacagaagaaaagtggctacggcaaaggtagagacaac
agagataacagggatagatatagaggacaaagaagagaaggcgctaaaagtagtaaagat
agtggcggatataagggtaagaaggataacagagactatagaggacctaaaaagaaataa
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