Alkalicella caledoniensis: HYG86_17320
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Entry
HYG86_17320 CDS
T07204
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acae
Alkalicella caledoniensis
Brite
KEGG Orthology (KO) [BR:
acae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acae03032
]
HYG86_17320 (topA)
03400 DNA repair and recombination proteins [BR:
acae03400
]
HYG86_17320 (topA)
Enzymes [BR:
acae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HYG86_17320 (topA)
DNA replication proteins [BR:
acae03032
]
Prokaryotic type
DNA Topoisomerases
HYG86_17320 (topA)
DNA repair and recombination proteins [BR:
acae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYG86_17320 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Cag12
Toprim_4
TIL_2
HypA
Motif
Other DBs
NCBI-ProteinID:
QNO16408
UniProt:
A0A7G9WCJ6
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All DBs
Position
3526002..3528074
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AA seq
690 aa
AA seq
DB search
MNLVIVESPSKAKTINKFLGKNYKVDASMGHIIDLPKSQLGVDLENFEVKYITIRGKGKI
LQELKKAGNKASKIYLATDPDREGEAISWHLANSLGIDGTQQCRVVFNEITKNAIKDAFK
KPRPIDKQLVDAQQARRILDRIVGYKISPILWRKVKKGLSAGRVQSVAVRLIVDREREIN
EFIPKEYWSLQVELNSKDKDILLPKLITYKGEKIEISTESEINNVISQLDKGEFTVSNVK
TSERQKHPAPPFTTSNLQQEAARKLNFTPKKTMMVAQQLYEGIKLGKKGSVGLVTYIRTD
STRLSDDFITSLRDMIDSQYGTKYLHKEIRAFKNKKNAQEAHEAIRPTEITNDPESIKEF
LSKEQYKLYKLIWLRTIASQMASAVYNVLTIDIKNGDYVFRQTGSTIKFTGFTEVYLEGK
DEIEEEEQIFKGNVSQGELLKLLNYHPKQHFTQPPPRFSEAMLVKVLEEKGIGRPSTYAP
IIDTISARGYVIKDKKVFIPTELGEIVTDLMLEHFPQIVDISFTAEMEDKLDKVEEGETS
WEDLLKDFYKTFKIDLEKAEENIPQVEIKDVESDVVCEKCGRNMVYKLGRFGKFLACPGF
PECRNTKALVEELDIQCPKCKKGKVVIRKTKKGRKFFGCSTYPDCEFQSWDQPIGEQCPN
CNEFLVEKGRENNKKIICSDSKCGYVKDRS
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagtaatagtggaatcaccatcaaaagcaaaaacaataaacaaattccttggt
aaaaattacaaggttgatgcatcaatgggccatataattgatttgccaaagagtcaactg
ggagtagacttagaaaactttgaagtaaaatatataactatacgtggtaagggtaaaata
ctacaagaacttaaaaaagctgggaataaggctagtaaaatatatctcgcaacagaccct
gatagggaaggggaagcaatttcttggcacctagcaaatagcctaggtatagatggcaca
caacagtgtcgagttgtttttaatgagattactaaaaatgccataaaagatgcttttaaa
aagccacgccctatagataagcaattagttgatgcacaacaagctagaaggatattagat
agaatcgtgggttacaaaattagccctatactatggaggaaagttaaaaaaggattaagt
gctggtagggttcaatcggtagctgtaagattgattgttgatagggaaagggaaattaat
gaatttatccctaaggaatactggtctttacaggttgaattaaatagcaaagataaagat
attcttttgccaaagctaattacatacaagggtgaaaaaatagaaatatccactgaatca
gaaataaataatgtaatttctcagcttgataagggtgaatttacagtaagtaacgttaaa
acgtcggaaagacaaaaacatcctgcaccaccatttaccacaagtaatttacaacaagaa
gcagctagaaaacttaattttacacctaagaaaacaatgatggttgcacaacaattatac
gagggaataaaattaggtaaaaaaggttcagttggtctagttacttacataagaactgac
tccactagattatccgatgattttatcaccagtttaagggatatgatagattctcaatat
ggtacgaagtatcttcataaagaaattcgtgcatttaaaaataagaaaaatgcccaagag
gcccatgaagccattagacctacagaaataacaaacgaccctgagtccataaaagaattt
ctatcaaaagagcaatacaagctttataaacttatatggttaagaaccattgcatcacag
atggcctcggcagtttataatgtactgacaattgatataaaaaatggtgattatgtattt
aggcaaacgggttctacaattaagttcactggttttaccgaagtatacttagaaggtaaa
gacgaaatagaagaagaggaacaaattttcaaaggtaatgtttcccaaggagaattactt
aaactcttaaattaccatccaaaacaacatttcacgcagcctcctccaagattttcagag
gcaatgttagtaaaggtccttgaagaaaaagggataggcaggccaagtacctatgcaccc
ataatagatacaatctctgccaggggttatgtaataaaggataagaaggtatttatacca
acagaactaggggaaatagtgacagatttgatgctagagcacttcccgcagatagtagac
atatcctttacagctgagatggaggacaaattagataaagtggaagaaggggaaacctca
tgggaagatcttttaaaagatttttataaaacatttaagattgacctagaaaaagctgaa
gaaaatatcccccaggtggaaataaaggatgttgaaagtgacgttgtatgcgagaaatgt
ggaagaaatatggtatacaagcttgggcgctttgggaagttcttagcttgcccaggattt
ccagaatgcagaaatacaaaagcgttagtggaagaattggatatccaatgtcctaagtgt
aaaaaaggaaaagtggttattagaaaaacaaaaaaaggaagaaagttcttcggctgttcc
acctatcctgattgcgaattccaatcatgggatcaaccaattggagagcagtgtccaaat
tgtaacgaatttttagtggaaaaaggtagagaaaacaataaaaaaattatctgtagtgat
tcaaaatgtggctatgtaaaagacaggagttga
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