Alienimonas californiensis: CA12_03970
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Entry
CA12_03970 CDS
T09792
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acaf
Alienimonas californiensis
Pathway
acaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CA12_03970 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acaf03019
]
CA12_03970 (recQ)
03400 DNA repair and recombination proteins [BR:
acaf03400
]
CA12_03970 (recQ)
Enzymes [BR:
acaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CA12_03970 (recQ)
Messenger RNA biogenesis [BR:
acaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CA12_03970 (recQ)
DNA repair and recombination proteins [BR:
acaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CA12_03970 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
ResIII
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QDT14325
UniProt:
A0A517P4P7
LinkDB
All DBs
Position
493398..495692
Genome browser
AA seq
764 aa
AA seq
DB search
MNTEQADTDTADTDTDTADTGRSDTERAEGDEAELRAVLRDFWGYDSFRPLQKEAMQCGL
AGRDSVVVLPTGGGKSLCYQAPAAVLHRRTGAVAVVVSPLIALMKDQVDALTAIGVPAAF
VNSTLPPEEKIAVSRRLRDKELACLYAAPETLVTDRMLDFLSELDVSFVAIDEAHCVSQW
GHDFRPEYRQLGMLRERFPDAAMHGYTATAGQKVREDVAFQLNLHDPAMLVGSFDRPNLT
FRARPASGTLGQIREVVKRHDGESGIVYCISRKKVDETADALRGLGVRAIAYHAGMSKEE
RTAAQDAFLADREDVVVATVAFGMGIDKPDVRFVVHAGMPKSIEHYQQEAGRAGRDGLAS
ECLLLHSGGDYRFWKSTLGELPPEPRANAEQSLNALYDYAQGALCRHKALVRYFDQDLES
DDCGACDICLGEVETVDDPLILGQKIVSCVYRLEQRFGGNHTADVLTGSKSEAVLSKGHD
SLSTYGLLSDHPKKAVRDWIEQLVGQGFLAKVGEYATLRITEAGQQLLKGERKPVLLAPA
KKVAAERPKRTSSAADDWEGVDEELFEHLRGVRGEVAREIGKPAYIVFNDASLKDMARRR
PTTEEGLSHCVGVGPKKLEDFGERFLEEIGAHCAEHGLTVDVEGGGASGGGASGGSMFGG
SRSISRNAAAAFPLFRDGLGVADAARELRVTESTAAGYLRDYILETKHDDPTTWVEPAAA
RQAREAFEACGLHRLKPAFEHLDGAVSYDDLKIVAACMAAGQSA
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaacacggaacaggcggacaccgacacggccgacaccgacaccgacaccgccgacact
gggaggtccgataccgaaagggccgagggcgacgaggccgaactgcgggccgtgctgcgg
gacttctggggctacgacagcttccgccccctgcaaaaagaggcgatgcagtgcggcctc
gccgggcgggacagcgtcgtcgtgctgccgaccggcggcgggaagagcctctgctatcag
gcccccgccgccgtgctgcaccggcggaccggggccgtcgccgtggtcgtcagcccgctg
atcgcgttgatgaaggaccaggtggacgccctgacggcgatcggcgtgccggcggcgttc
gtgaacagcaccctgccgccggaggagaagattgcagtctcccgccggctgcgcgacaag
gagctcgcctgcctgtacgcggcgccggagaccctcgtcaccgaccggatgctggacttc
ctctcggagctggacgtcagcttcgtggcgatcgacgaggcccactgcgtcagccagtgg
gggcacgacttccgtccggagtaccgccaactcggcatgttgcgggagcggttccccgac
gcggcgatgcacggctacaccgccaccgccggccagaaggtgcgggaggacgtcgccttc
caactgaacctgcacgacccggcgatgctggtcggcagcttcgaccggccgaacctcacc
ttccgcgcccgcccggcctccggcacgctgggccagatccgcgaggtggtcaagcggcac
gacggcgagagcggcatcgtctactgcatctcccgcaagaaggtggacgagaccgccgac
gccctgcggggactgggcgtgcgggcgatcgcctaccacgccgggatgtccaaggaggaa
cgcaccgccgcccaggacgcctttctggcggatcgggaggacgtggtcgtggccacggtc
gccttcggcatgggcatcgacaaaccggacgtgcggttcgtcgtccacgccggcatgccc
aagtcgatcgagcactaccagcaggaagccggccgcgccggccgcgacggcctcgccagc
gaatgtctcctgctgcacagcggcggggattatcggttctggaaaagcaccctcggcgaa
ctcccccccgaaccccgggccaacgcggagcaatctttaaacgctctctacgactacgcc
cagggggcgctctgccgtcacaaagccctcgtccgctacttcgaccaggatttagaaagc
gacgactgcggcgcctgcgacatctgcctcggcgaggtggagacagtggacgacccattg
atcctcgggcaaaagatcgtcagttgcgtgtaccgtttggagcagcggttcggcggcaat
cacaccgccgacgtcctgaccggctccaaaagcgaagcggtgctgtccaagggtcatgat
tccctcagcacctacgggctgctcagcgatcacccgaagaaggcggtgcgggactggatc
gaacagctcgtcgggcagggttttctggcgaaggtcggcgagtacgccacgctccgcatc
accgaggccggtcagcagttattaaaaggagagcggaagccggtgctgctcgcgccggcg
aagaaggtcgccgcggaacggccgaagcggaccagcagcgccgcggacgactgggagggc
gtggacgaggagttgttcgaacacctccgcggcgtccgcggggaggtggcccgggagatc
ggcaagccggcctatatcgtcttcaacgacgccagcctgaaggacatggcccgccgccgc
ccgaccaccgaggaaggcctaagccactgcgtgggcgtggggccgaaaaagctggaggac
ttcggcgaacgcttcctggaggagatcggcgcccactgcgccgaacacggcctgacggtg
gacgtggagggcggcggggcgtccggcggcggggcctccggggggagcatgttcggcggg
agccggtcgatcagccgcaacgccgccgccgcgttccccctgttccgcgacggcctgggc
gtggcggacgccgcccgggaactccgcgtcaccgagagcaccgccgccggttacctgcgg
gactacatcctcgaaacgaagcacgacgaccccaccacctgggtcgagcccgccgcggcg
agacaggcccgggaggccttcgaggcctgcggcttgcaccggctcaaaccggccttcgaa
cacctcgacggcgccgtgagctacgacgatctcaagatcgtcgccgcctgcatggccgcg
gggcagtcggcctga
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