KEGG   Alienimonas californiensis: CA12_04210
Entry
CA12_04210        CDS       T09792                                 
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
acaf  Alienimonas californiensis
Brite
KEGG Orthology (KO) [BR:acaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acaf03400]
    CA12_04210 (rhlE)
Enzymes [BR:acaf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CA12_04210 (rhlE)
    5.6.2.6  RNA 3'-5' helicase
     CA12_04210 (rhlE)
DNA repair and recombination proteins [BR:acaf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CA12_04210 (rhlE)
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: QDT14348
UniProt: A0A517P4N1
LinkDB
Position
complement(524074..526584)
AA seq 836 aa
MTDAPSRAAVARAKRAVRGWFESTVRSPFRFQTQAWNAYANGESGLIHATTGTGKTLAAW
LGPVIDGLARGEIRDPAKAGETETKRRRRSPPLRVLWITPLRALAGDTEHSLRVPLDALG
LNWSLESRTGDTASKIRSRQTKRLPTALLTTPESLSLALARTDCVEQFAHLECVIVDEWH
ELLGSKRGSQTELCLARLRRWRPFLKTWGLSATLGNIDEAAETLLGADAEIPTVISGGRR
KKYAVDSILPETVERFPWSGHLGLKQLDQVLPIVEGAASSILFTNTRSQTELWYQALLKA
RPDWAGRIALHHGSLGKESRRWVEAGLKNGELKCVVSTSSLDLGVDFAPVERVLQVGSPK
GVARLLQRAGRSGHAPGQTSRVTCVPTHALELVEVAAARAAMEAGAIEARTPPRKPLDVL
VQHAVTIALGTGFRRDELLEEIRTASSFAAVTDAEWDWCLDFITRGGEALRNYPEYSRVA
LREGEYRVEDKTVARRHRMSIGTIASDAAVEVRFLKGARLGMVEEAFVSRLKPGDKFLFA
GRPLELVKVFEMKAWVRKAKGVTGAVPRWSGGRMPLSSELAAAVRSKLEEARDGNDRGPE
MTAVRPILDLQQRWSHLPGRDEFLIERTKTRDGHHLFFFPFAGRQVHEGLGALWALRLSR
KVSTTFAVAVNDYGVELLSPVPAPLEAALKDGLLSPERLREDVAESLNAVEMAKRQFREI
ARVAGLVFTGYPGAGKSAKQMQASSGLLYDVFQNYDPGNLLFKQATEEVLDRQLDAARLE
ETLNRLGRARLILNECRRPTPLAFPLLVDRMRERVSSEKLSDRVKRMTLQLERAAG
NT seq 2511 nt   +upstreamnt  +downstreamnt
gtgactgacgccccgtcgagagccgcggtcgcgcgggcgaagcgggcggtccgcgggtgg
ttcgaatcgaccgtccgcagcccgtttcgctttcaaacccaggcctggaacgcctatgcg
aacggtgagagcgggctaattcacgccaccaccggcaccggcaaaacgctggcggcgtgg
ctggggccggtcatcgacggcctcgcccgcggcgaaatccgcgaccctgccaaagccggc
gagacggagacgaaacgccgccgccgttccccgccgctgcgggtgttgtggatcaccccg
ctgcgggcgctggccggggatacggagcacagcctccgcgttccgctggacgccctcggg
ttgaactggtcgttggaaagccgcaccggggacaccgcctccaagatccgctcccgtcaa
accaagcgtctgccgacggcgttactgacgacgccggagagcctctcgctggctctcgcc
cggacggactgcgtggagcagttcgcccacctcgaatgcgtgatcgtggacgagtggcac
gagttattaggttctaaacgcggcagccagacggaactctgcctcgcccgcctgcggcgt
tggcggccgtttttgaagacgtgggggctgagcgccacgctgggaaatatcgacgaggcc
gcggagacgctgctgggggccgacgcggagatcccgaccgtcatctccggcggccgccgc
aagaaatacgcggtcgattcgatcctgccggagaccgtcgaacgtttcccctggtccggg
cacctggggctcaaacagctcgatcaggtgttgccgatcgtggagggggccgcgtcctcc
attctgtttacgaacacccgcagccagacggagttgtggtaccaggcgttgctcaaagcc
cggccggactgggcggggcggatcgcgttgcatcatggttcgttgggcaaggagagccgc
cggtgggtcgaggcggggctcaagaacggcgagttaaaatgcgtggtgagcacgtcgagt
ctggacctcggcgtggacttcgccccggtcgagcgggtgttgcaggtcggcagcccgaag
ggcgtggcgagactgctccagcgggccggccgcagcgggcacgccccggggcagacgagc
cgcgtgacttgcgtgccgacgcacgcgttggaattggtggaggtcgccgccgcccgggcc
gcgatggaggccggggcgatcgaggcccgcacgccgccccgcaagccgctggacgtgctg
gttcaacacgccgtgacgatcgccctcggcacggggttccgtcgggacgaattattagaa
gaaatccgcaccgcgagcagcttcgccgcggtgacggacgcggagtgggactggtgcctg
gacttcattacccgcggcggggaggcgttgcggaactatcccgagtattcccgcgtcgcc
ctgcgggagggcgaatatcgagtggaggacaaaaccgtcgcccgccggcaccggatgagt
atcggcacgatcgcctcggacgcggcggtcgaggtgcggttcctcaagggggcccggctg
ggcatggtggaggaggcgttcgtcagtcggctcaaaccgggcgataagttcctgttcgcc
gggcggccgctggagttggtcaaggtgttcgagatgaaggcctgggttcgcaaggcgaag
ggcgtgaccggcgccgtgccgcggtggagcgggggccgcatgccgctctccagcgagtta
gccgctgccgtgcgctccaagctggaggaggcccgcgacgggaacgaccgtgggccggag
atgaccgccgtgcggccgatcctcgacctgcaacaacgctggtcccacctgcctgggcgg
gacgagtttctcattgaacgcaccaaaacccgcgacgggcatcacctgtttttcttcccc
ttcgccggccggcaggtgcacgaggggctgggggcgttgtgggcgctgcggctgtcgcgg
aaggtgtcgacgacgttcgccgtcgcggtgaatgattatggcgtcgagttattatcgccc
gtgccggccccgctggaggcggcgttgaaggacggactgctctccccggaacgcctgcgg
gaggacgtagcggagtcgctcaatgccgtcgagatggccaagcggcagttccgggagatc
gcccgggtcgccggcttggtattcaccggctaccccggcgccggcaagtccgcgaagcag
atgcaggcctccagcgggctgctctacgacgtctttcaaaattacgacccgggcaacctg
ctgttcaaacaggcgaccgaggaggtgctggaccgacagctcgacgcggcccgactggag
gagacgttgaaccgcctcggccgggctcgtctgattctcaacgaatgccgccgcccgacg
ccgctggcgttcccgctgttggtggaccgaatgcgggagcgcgtcagcagcgaaaagctg
agcgatcgcgtgaagcggatgacgctgcaattggagcgggcggcgggctga

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