Alienimonas californiensis: CA12_12170
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Entry
CA12_12170 CDS
T09792
Symbol
vsr
Name
(GenBank) Very short patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
acaf
Alienimonas californiensis
Brite
KEGG Orthology (KO) [BR:
acaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acaf03400
]
CA12_12170 (vsr)
DNA repair and recombination proteins [BR:
acaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CA12_12170 (vsr)
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Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
QDT15136
UniProt:
A0A517P6Y5
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All DBs
Position
complement(1573056..1573439)
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AA seq
127 aa
AA seq
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MRAVRSENTGPERVVRKLAHRLGYRFRLHRRDLPGTPDLVFPGRRKALFVHGCFWHRHPH
PDCRRGRSTPASRTEYWEAKFARNVTRDRRNERELRAAGWGVMVVWECQTRPAELDRLAG
RLRRFLG
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcggtgcggtcggagaacaccgggccggagcgcgtggtgcgaaaactggcccat
cgactgggctatcggttccgactgcaccgccgcgacctgcccggcacgccggacctggtc
ttccccggccggcggaaggcgctcttcgtgcacggctgcttctggcatcggcacccgcat
cccgattgccgtcgcggtcgcagcacgccggccagccgcacggagtactgggaggcgaag
ttcgcccgcaacgtgacccgcgatcgccgcaacgagcgggaactgcgggccgccggctgg
ggggtgatggtcgtgtgggaatgccagacccggccggcggaactggaccggctggccggc
cggctgcggcggtttctgggctga
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