Alienimonas californiensis: CA12_15860
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Entry
CA12_15860 CDS
T09792
Symbol
yhaM_1
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
acaf
Alienimonas californiensis
Brite
KEGG Orthology (KO) [BR:
acaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acaf03019
]
CA12_15860 (yhaM_1)
Messenger RNA biogenesis [BR:
acaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CA12_15860 (yhaM_1)
BRITE hierarchy
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QDT15501
UniProt:
A0A517P7Z8
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All DBs
Position
2035020..2036048
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AA seq
342 aa
AA seq
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MLFPETVSKLSDLTPGATADVFALLSSKKQDVTKTGKPFYKCTFRDAAREASVMVWSDSG
HFADCEANWKKGTFYKLRGTYEEGNYGPQLSLDKIRPVLPADADAGFDEADFFETSRFDA
DKMFRALTTLCEEKIESAPLRAVVFKILNDRAEAFKKWPAASRNHHAFAGGLLEHTLSVV
RTTVWLCEKYAGLYPNLAPPLCTDAAIAGATLHDVGKLEELDGSPAGADYTPTGRLLGHI
LIGRDWLREAAAWQADQPAGPVDAELLLRTEHIVVSHHGIREFGSPAEPHTPEALIVQHA
DDLDAKFSMLADSLTQATGEGSFTPFSKTFGKPIFRGLSGTA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgctgttccccgagaccgtctccaagctgtcggacctcacgccgggggcgaccgccgac
gtgttcgccctgctctcctccaaaaaacaggacgtcacgaaaaccggcaagccgttctat
aaatgcaccttccgggacgccgcccgggaggcctcggtaatggtctggagcgactccggc
cacttcgccgactgcgaggcgaactggaagaagggaacgttctacaagctccgcggcacc
tatgaggaaggcaattacggtcctcaactgagcctcgacaagatccgccccgtcctgccg
gcggacgcggacgccggctttgacgaggcggacttcttcgagaccagccgcttcgacgcg
gacaagatgtttcgggccctgacgaccctgtgcgaggagaagatcgagagcgccccgctg
cgggcggtcgtgttcaagatcctgaacgaccgggccgaggcgttcaaaaaatggccggcg
gccagccgcaatcatcacgcctttgctggcggattgttggagcacaccctcagcgtggtg
cggacgaccgtctggctgtgcgaaaaatacgccggcctgtacccgaacctcgccccgccg
ctgtgtacggacgccgcgatcgccggggccacgctgcacgacgtgggcaagctggaagag
ctcgacggttcccccgccggggcggactacacgccgaccggccggttgctggggcacatt
ctcatcggccgggactggctgcgggaggccgccgcctggcaggccgaccagcccgccggg
ccggtggacgcggagttattactaaggacggaacatatcgtggtgtcgcatcacgggatt
cgggagttcggcagccccgccgagccgcacacccccgaagccctgatcgtgcagcacgcg
gacgacctggacgcgaaattctcgatgctcgccgacagtctgacgcaggcgaccggcgag
ggatcgttcacgccgttcagcaagacgttcggcaaaccgatcttccgcgggctgtcgggc
acggcctaa
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