Alienimonas californiensis: CA12_18330
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Entry
CA12_18330 CDS
T09792
Symbol
degA
Name
(GenBank) HTH-type transcriptional regulator DegA
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
acaf
Alienimonas californiensis
Brite
KEGG Orthology (KO) [BR:
acaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acaf03000
]
CA12_18330 (degA)
Transcription factors [BR:
acaf03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CA12_18330 (degA)
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
PucR
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QDT15741
UniProt:
A0A517P8P5
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All DBs
Position
2332947..2334038
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AA seq
363 aa
AA seq
DB search
MSASNLTVTLGDVAAAAGVSVSTASRALSGNAKACRISDATADRVRNHARRLGFRPNLLA
RSLQSRRSGLLGVVVPDVANPFFAAIAKEVTRGAEETGRSVLLADSGESSDREVKLVAEL
QARRVEGLVVCPVGVDSDHLEAANAAGTPVVVVDRGFRGGSLPTVTSDHRGGAERLVEHL
VGLGHRAIGIVQGRPGTLPNDDRLRAARRTLAAAGVPADDVPVAGDGFTERSGYESAARL
LADRPDVTALFAFSTPNAFGALRAAAEAGRSVPDDLAMVCFDEVPHVEFLRVSLTAAAQD
VRRLGRTAAEVMAERLETGRPPRRRRYTVPVKFVARASSGGPLPGAGARRTRSRELVPAG
APR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcgaacctgacggtcacgcttggggacgtcgcggcggccgcgggggtgagc
gtgtccaccgcgtcgcgggctttgagcggcaacgcgaaggcgtgtcggatcagcgacgcg
acggcggaccgggtccggaatcatgcccggcggctggggttccggccaaacctgctggcc
cggtccctgcagtcgcggcggagcgggctgctgggagtcgtcgtgccggacgtggccaac
ccgttcttcgccgcgatcgccaaggaagtgacgcggggggcggaggagaccgggcggagc
gtgctgctggcggacagcggggagtccagcgaccgcgaggtcaagctcgtcgccgagctg
caggcccggcgggtggaggggctggtggtctgcccggtcggggtggactcggaccatctg
gaggccgcgaacgccgcagggacgccggtcgtggtggtcgaccgcgggtttcggggcggg
tcgctgccgaccgtcacgtcggaccaccgcggcggggcggagcggctggtcgagcacctg
gtggggttggggcaccgggcgatcgggatcgtgcaggggcggcccggcacgctcccgaac
gacgaccggctgcgggccgcccgccgcacgttggccgccgccggggtgccggccgacgac
gtgccggtcgcgggggacgggttcacggagcggtccgggtacgagtcggccgcccggctg
ctggcggatcggccggacgtgacggccctgtttgcgttcagcacgccgaacgcattcggg
gctttgcgggccgcggcggaggcggggaggtccgtgccggacgatctggcaatggtctgc
ttcgacgaggtgccgcacgtggagttcctccgcgtttcgctgaccgccgccgcccaggac
gtgcggcgattggggcggaccgcggcagaggtgatggcggagcggctggagaccggccgc
ccgccccggcgccggcggtacacagtgccggtgaagttcgtcgcccgcgcctcctccggc
gggccgctcccgggggccggggcgaggcggacccgctcgcgtgagctggtcccggcgggg
gcgccgcgatga
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