Alienimonas californiensis: CA12_18480
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Entry
CA12_18480 CDS
T09792
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
acaf
Alienimonas californiensis
Pathway
acaf03420
Nucleotide excision repair
acaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CA12_18480 (pcrA_1)
03430 Mismatch repair
CA12_18480 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acaf03400
]
CA12_18480 (pcrA_1)
Enzymes [BR:
acaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CA12_18480 (pcrA_1)
DNA repair and recombination proteins [BR:
acaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CA12_18480 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
CA12_18480 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
Tudor_1_RapA
AAA_22
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QDT15755
UniProt:
A0A517P8R4
LinkDB
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Position
complement(2352568..2354985)
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AA seq
805 aa
AA seq
DB search
MSRPPRPRPPQPSPEELSVDHSRAAAGVDRPETPDDLTPPQRAAVEHFRGPLLVLAGPGS
GKTRVITRRIARLVERGVDPRQILAITFTNKAAGEMADRVAALLPGTRVWVSTFHRFCSR
LLRRYGQAVGLKENFSIYDTADQTALLRRVLSEKDVDAAAYPPGQLLNRIGRAKNEMLTA
ERFRLKFEHEVGDHIEAVLAKVYPAYQKALLDSNAVDFDDLLLHAVTLLEDSPELREHLD
DRHRFILVDEYQDTNLAQYQLVKALSQDHPNLCATGDPDQSIYGWRGAKIENILRFERDY
PGAKAIRLEENFRSTGAILFAADELIANNVHRKAKKLIGVGEEGEAPRRLYCRDGRHEAD
LIAEEIHDAAHAGKYKPADVAVFYRVNSLSRELELAMSRRGVPYQVAAGTAFYDRMEVKD
TLAYLKLLANPDDRVAFARAVNKPKRGVGNTTQHRVLNFADAHGLDMLEAARRAGEASGV
SKRAATLVGRFAAVIDALSEKAHGPVAPLVRAVLDESGLAKAWAEGDEEEMQRLANADEL
VTAAAQYDHEQQGAGSLDGFLETTALLADSDTVEPESGRVTLMTLHAAKGLEFPVVYVVG
VEQNLLPHERSLRSHDGREIEEERRLLFVGVTRAMKKLTVTHTRKREVRGRPQHCVPSDF
LTEMTLDLDDRSGGDAWGSAGYDIEDFSQDYDDSPEWEHPQAGESDEPEPTERPAGVGSL
TQNKLRLTTAAGLLNGETTGAAVPVREEGPLGFKVGQTVRHPRYGLGTVTHSDGSARNRR
VSVLFEDAENPKTFVASKAPLQPVG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccccccccgaccgcgaccgccgcagccgtctccggaagagttgtccgtcgat
cactcccgagccgccgcgggggtggatcggccggagacgccggacgacctcacgcccccc
cagcgggcggcggtggagcacttccgcgggccgctgttggtgctggccgggccggggtcg
ggcaagacgcgggtcatcacccgccgcatcgcccggctggtggagcggggcgtggacccg
cggcagatcctcgcgatcaccttcaccaacaaggcggccggcgagatggccgaccgcgtc
gccgccctgctgcccggcacgcgggtctgggtcagcaccttccaccggttctgcagtcgg
ctgctccgccgctacgggcaggccgtgggcttgaaggaaaacttttcgatctacgacacc
gccgaccagacggcgctgctgcggcgggtgctcagcgaaaaggacgtcgacgccgccgcc
tatccccccggccagttattgaaccgcatcggccgggccaagaacgaaatgctgaccgcg
gaacggttccgcctgaagttcgagcacgaggtcggcgaccatatcgaagccgtgctcgcc
aaggtctatcccgcctatcagaaggccctgctggacagcaacgccgtcgacttcgacgac
cttttattgcacgccgtcacgctgctggaggacagcccggaactccgtgagcacctggac
gaccggcaccgttttattctcgtcgacgaatatcaggacacgaacctcgcccagtatcaa
ttagtgaaggccctctcgcaggatcacccgaacctgtgcgccaccggcgacccggaccag
agcatctacggctggcgaggggcgaagatcgaaaatattctgcggttcgagcgggactat
ccgggtgccaaagcgattcgcctggaggaaaacttccgcagcaccggggcgattctgttc
gcggcggacgaattgatcgccaacaacgtccaccgcaaagccaagaagctgatcggcgtg
ggcgaggagggcgaggccccgcgacgtttatattgccgcgacggccggcacgaggcggat
ctgatcgccgaggaaatccacgacgccgcccacgccggcaagtacaaaccggcggacgtg
gcggtcttctatcgcgtcaattcgctctcccgggagctggaactggcgatgagccgccgc
ggcgtgccctatcaggtcgccgcgggcacggcgttttacgaccggatggaggtcaaggac
acgctggcctatctcaaattgctggcgaacccggacgaccgcgtcgccttcgcccgggcc
gtcaataaaccgaagcggggcgtcggcaatacgactcagcaccgggtgttgaacttcgcc
gacgcccacggcctcgacatgctcgaagccgcccgccgggccggtgaggccagcggggtc
tccaagcgggcggccacgctggtcggccggttcgcggccgtcatcgacgccctcagcgag
aaggcccacggcccggtcgccccgctggtgcgggccgtgctggacgaaagcggcctcgcc
aaagcctgggcggagggggacgaggaggagatgcagcgcctcgccaacgccgacgaactc
gtcaccgccgccgcccagtacgatcacgaacaacagggcgccggcagcctcgacggcttc
ctggagacgaccgccctgctcgccgattcggacaccgtcgaaccggagagcggccgcgtc
accctgatgacgctgcacgcggcgaaggggctggagttcccggtcgtgtacgtcgtcggg
gtggagcagaatttattgccgcacgaacgcagcctgcggtcgcacgacggccgcgaaatt
gaagaggaacgccggctgctgttcgtcggcgtgacccgggcgatgaaaaagctcaccgtg
acccacacccgcaagcgggaggtccgcggccgcccgcagcactgcgtgcccagcgatttc
ctcacggagatgacgctggacctcgacgaccgcagcggcggcgacgcctggggctccgcg
ggctacgacatcgaagatttttcgcaggactacgatgacagccccgagtgggagcacccg
caagccggggagagcgacgagcccgagccgaccgaacgcccggcgggcgtcggctccctc
acgcaaaataagctgcggctcaccaccgccgcgggtctgctcaacggcgagacgactggg
gcggccgttcctgttcgggaagaagggccgctggggttcaaggtcggccagaccgtccgc
catccgcgctacggcctgggcacggtgacgcacagcgacggcagcgcccgcaaccgccgc
gtcagcgtgctgttcgaggacgccgagaaccccaaaaccttcgtcgccagtaaagccccg
ctgcaaccggtcgggtga
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