Alienimonas californiensis: CA12_18690
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Entry
CA12_18690 CDS
T09792
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
acaf
Alienimonas californiensis
Pathway
acaf03030
DNA replication
acaf03430
Mismatch repair
acaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CA12_18690 (polC)
03430 Mismatch repair
CA12_18690 (polC)
03440 Homologous recombination
CA12_18690 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acaf03032
]
CA12_18690 (polC)
03400 DNA repair and recombination proteins [BR:
acaf03400
]
CA12_18690 (polC)
Enzymes [BR:
acaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CA12_18690 (polC)
DNA replication proteins [BR:
acaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CA12_18690 (polC)
DNA repair and recombination proteins [BR:
acaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CA12_18690 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
WYL
Rv2179c-like
RNase_H_2
DEDDh_C
Maelstrom
Motif
Other DBs
NCBI-ProteinID:
QDT15775
UniProt:
A0A517P8T6
LinkDB
All DBs
Position
2375237..2376175
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AA seq
312 aa
AA seq
DB search
MGPSAAAPPAVPPDPDAALGDVCFVAFDLETTGCTAASDRTVEIGAVRFDLAGRELGTFE
ELVNPGRPIPANVIRVHGITDAHVVDAAPMAAVLPRFLDWIGESGAPPVLMAHNARFDMG
FVGAGLHRAGLTAPAAPVIDTVRLSRRRMPTERSHSLKNCAARFGVTNDRAHRALSDARA
LMAVFLNLVQRPPAVRTVGQLDALCGCGPLRAEIATPRGGVTTGSSTGVGWPRRRRRYEP
PPGDHAALTAAIATRTTVRIVYDGGTKGVAARSVTPRSLRRRGGELYLFAWCHTDAKEKQ
YRVDRIREVTTR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggtccctccgcggcggcacccccggcggtcccgcccgatcccgacgccgcgttgggc
gacgtctgcttcgtcgccttcgatctggagacgaccggctgcaccgccgcgagcgaccgg
acggtggagatcggggccgtccgcttcgacctcgccgggcgcgagttggggacgttcgag
gaactggtgaaccccggccggccgatcccggcgaacgtgattcgggtgcacggcatcacg
gacgcccatgtcgtcgacgcggccccgatggcggcggtgctgccgcggttcctcgactgg
atcggggagagcggcgcccccccggtcctgatggctcacaacgcccggttcgacatggga
ttcgtcggggccgggctgcatcgggccgggctgacggcgccggcggcgccggtgatcgac
accgtgcggctctcccgccggcggatgcccaccgaacgcagccattccctcaaaaactgc
gccgcccgcttcggggtgacgaacgaccgggctcaccgggcgctgtccgacgcccgcgcc
ctgatggcggtgttcctgaacctcgtccagcgcccgccggcggtgcggacggtcgggcaa
ctcgacgccctgtgcggctgcggcccgctgcgggcggagatcgccacgccccgcggcggc
gtcacgaccggcagttccacgggcgtcggctggccgcgacggcggcggcgttacgaaccc
ccgccgggcgaccacgcggctctcaccgcggcgatcgccacgcggacgacagtccgcatc
gtctacgacggcggcacgaagggcgtggccgcccgctccgtcaccccccgcagcctgcgg
cggcggggcggggagctgtacctgttcgcctggtgccacaccgacgccaaggaaaaacag
taccgcgtcgaccgcatccgcgaggtcacgacccgctga
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