Alienimonas californiensis: CA12_21650
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Entry
CA12_21650 CDS
T09792
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acaf
Alienimonas californiensis
Pathway
acaf03030
DNA replication
acaf03430
Mismatch repair
acaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CA12_21650 (dnaE)
03430 Mismatch repair
CA12_21650 (dnaE)
03440 Homologous recombination
CA12_21650 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acaf03032
]
CA12_21650 (dnaE)
03400 DNA repair and recombination proteins [BR:
acaf03400
]
CA12_21650 (dnaE)
Enzymes [BR:
acaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CA12_21650 (dnaE)
DNA replication proteins [BR:
acaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CA12_21650 (dnaE)
DNA repair and recombination proteins [BR:
acaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CA12_21650 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
RRP40_N_mamm
Motif
Other DBs
NCBI-ProteinID:
QDT16067
UniProt:
A0A517P9K8
LinkDB
All DBs
Position
complement(2707350..2710976)
Genome browser
AA seq
1208 aa
AA seq
DB search
MSQLSPDAGAAPSTPADGAPPPFAHLHCHTHYSLLDGMTKIPDLVRQTKASGMNAAAITD
HGNLYGAMEFYHACRAEDVNPILGIEAYMAPRSRTERGGKMKESNFHLTLLAQNLTGFRN
LVKMSSVAYTEGFYYKPRMDKELLAAHSEGLIVLSGCVSGELSRHLLNEQKEEAEKLCQW
YTEVFGDRFYMEIQDSGIQIQKDAGEATIDLANRMGLPLVATNDSHYLCGEDAVAHDILL
CVNTRSQRTDAKRMRLGSQDFFVKSPEEMYKVFPNQQEAVRRSQEIADRCDIQLEENPKY
YPVFKPPRQLTDTEYLREICENAMEERYGDEATQAHRDRLDLELGVIEYMGYSSYFLIVW
DFVEFAKKHDIPCVARGSAAGAIVAFLLGLSDVCPLKYDLLFERFLDKSRKEPPDIDIDF
CRDRRQMVIDYTKEKYGEDSVAQIGTFGTLKAKAVVRDVGRALGVPLARVNEIAKAVPDT
LGIKLADAVKQSPELSDAYNNDPQIKELIDIAYRLEGLARSAGTHAAGVVVADQPLQDLL
PLQVITGKEDVITQWDGPTVEAAGLLKMDFLGLRNLTILDKSIKNVLARHPDFDLKVLHD
VDTPDPATYRLLQRGETKGVFQLESGGMRDLLTKMRPDKFADIIATSALYRPGPLEGGMV
MDYVDIKNGRKQVAKIHPLVDPVLADTYGIMVYQEQVMRILNRVGGIELASAYKCIKAIS
KKKLAIIAQFRQQYIDGAKERGVDESVAVNLFELIEKFAGYGFNKSHSTAYGLIAYQTAY
LKAHYPVEFMAALLSCGMESSDRIMEHVEDARRQGIEVLPPDVNRSDVEFSVVTNEDGQD
GITFGLGAVKGLGLSAMEALVREREANGPYKDIFDVTERIDPGHLNRSATEILIRCGALD
SLGPTRAQHSAVVDRAVQAAANKARDAAAGQASLFGGDDDEEDAPEVAASFPDLPDWTRA
VKLAHEKEVFGFYLTSHPLTEAGDAITKFATATTLELGEAQDGDEVTVGGMVGAIKKART
KKPSRNGNTDYVMFDFEDPEGCVRCIMWPEEFARQGDLVKAEAVLYVKGKVDRRGREPNL
IVNRLMTADDAIKEHTRQLAVKFQKGLHADAEMARVREILGRYPGETDVVVLIDTGSAED
LTGDGANGDGANGETPGVRTRYRLSTPGHLRVSCGPGLRRELAEVLGEQHLLFWSPPVRR
KTASPSLN
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccaactctcccccgacgccggcgccgccccctccaccccggccgacggcgccccg
ccgccgttcgcccacctgcactgccacacgcattacagcctgctggacgggatgaccaag
atcccggacctcgtccgccagacgaaggcgtccggcatgaacgccgcggcgatcacggac
cacggcaacctctacggggcgatggagttctatcacgcctgccgggcggaggacgtgaat
ccgatcctcggcatcgaggcctatatggccccccgcagccgcacggaacgcggcgggaag
atgaaggaatcgaactttcacctcacgctgctggcccagaacctcacggggttccgcaat
ttggtcaagatgagcagcgtggcctacaccgagggcttctattacaagccccggatggat
aaggaactgctcgcggcccacagcgaggggctgatcgtcttgagcgggtgcgtctccggg
gagctgtcccgccacctgctcaacgagcagaaagaggaggccgagaagttgtgccagtgg
tacacggaggtattcggcgaccgcttttatatggagatccaggacagcggcatccagatc
cagaaagacgccggcgaggcgacgatcgacctcgccaatcgcatgggcctgccgctggtc
gccaccaacgacagtcactatctctgcggcgaggacgccgtcgcccacgatattttattg
tgcgtcaacacccgcagccaacggaccgacgccaagcggatgcggctgggttcgcaggac
ttcttcgtgaagtccccggaggagatgtacaaggtcttcccgaaccagcaggaggccgtc
cgccgcagtcaggagatcgccgaccgctgcgatattcagctggaggagaacccgaagtac
taccccgtcttcaagccgccccgccagctgacggatacggaatacctgcgggagatctgc
gaaaacgcgatggaggagcgttacggcgacgaggccacgcaggcccaccgggaccggctg
gacctggagttgggcgtgatcgaatacatggggtattcgagctacttcctgatcgtgtgg
gacttcgtcgaattcgccaagaaacacgatatcccctgcgtggcccgcggttcggcggcg
ggggcgatcgtggcgttcctactgggcctgtcggacgtctgcccgctcaaatacgacctg
ctgttcgagcggttcctcgataaaagccggaaggagccgccggatatcgatatcgacttc
tgccgggaccgccggcagatggtcattgattatacgaaggagaaatacggcgaggacagc
gtcgcccagatcggcacgttcggcacgctgaaggccaaggcggtcgtgcgggacgtcggc
cgggcgctgggcgtgccgctggcccgcgtcaacgagatcgccaaggcggtgccggacacc
ctcggcattaagctcgccgacgccgtcaagcagagcccggagctgtcggacgcctacaac
aacgatcctcagatcaaggagttgatcgacatcgcctaccggctggagggtctggcccgc
agcgccggcacccacgcggcgggcgtcgtggtggcggatcagccgctccaggatctcttg
ccgctccaggtcatcaccggcaaggaggacgtcatcacccagtgggacggccccacggtg
gaggcggcggggctgctcaagatggacttcctggggctacgaaacctcacaattcttgac
aagtccatcaagaacgtgctggcccggcacccggacttcgatctcaaggtcctgcacgac
gtcgacacgccggacccggccacctatcgcctgctgcagcgcggcgagacgaagggcgtg
ttccagctggagtccggcggcatgcgggacctgctgacgaagatgcggcccgacaagttc
gcggacatcatcgccaccagcgccctctatcgccccggtccgctggagggcggcatggtg
atggactacgtcgacatcaaaaacggccgcaagcaggtcgcaaagattcaccccctggtg
gaccccgtcctggcggacacctacgggatcatggtctaccaggaacaggtcatgcggatc
ctgaaccgggtcggcggcatcgagctggccagcgcctacaagtgcattaaggccatttcg
aagaagaagctggcgatcatcgcccagttccggcagcagtatatcgacggggcgaaagaa
cgcggcgtcgacgagtccgttgcggtcaatctgttcgaactgatcgaaaagttcgccggc
tacggcttcaacaagagtcacagcaccgcctacggcctgatcgcctatcagacggcctat
ctgaaggcacattaccccgtcgaattcatggcggccctgctctcctgcgggatggagagc
agcgaccgcattatggagcacgtcgaggacgcccgccggcagggcatcgaggtcctcccc
ccggacgtgaaccgcagcgacgtcgagttcagcgtcgtcacgaacgaggacggccaggac
ggcatcaccttcgggctgggggccgtgaagggcctcggcctgtccgcgatggaggcgctg
gttcgggagcgggaggcgaacggcccctataaagacatcttcgacgtcacggagcggatc
gacccgggccatctgaaccgctccgcgacggagattctcattcgctgcggggcgctggat
tcgctcgggccgacgcgggcgcagcacagcgccgtggtggaccgggcggtgcaggccgcg
gcgaacaaggcccgcgacgccgccgccgggcaggccagcctgttcggcggggacgacgac
gaggaggacgccccggaggtcgccgccagcttcccggacctgccggactggacccgggcc
gtgaagctcgcccatgaaaaagaggtattcggcttctatctgaccagccacccgctgacg
gaggccggcgacgcgatcaccaagttcgccaccgccacgacgctggaactcggcgaggcc
caggacggcgacgaggtgaccgtcggcgggatggtcggggcgattaaaaaagcccgcact
aaaaagccgtcccgcaacggcaacaccgactacgtcatgttcgactttgaagatccggag
ggctgcgtgcggtgcatcatgtggccggaggagttcgcccggcagggggatctcgtgaag
gcggaggccgtgctgtacgtcaaagggaaggtcgaccgccgcgggcgggagccgaacctg
atcgtcaaccgcctgatgacggcggacgacgccatcaaggagcacacccggcaactcgcc
gtgaagttccagaagggcctgcacgcggacgcggaaatggcccgcgtgcgggagatcctc
ggccgttatcccggcgaaacggacgtcgtcgtcctgatcgacaccggctccgcggaggac
ctgaccggcgacggcgcgaacggggacggggcgaacggcgaaacccccggggtgcggacg
cggtatcgtctctccacgcccgggcacctgcgggtctcctgcgggccgggtctgcggcgg
gaactggccgaggtgctgggcgagcaacacctgctcttctggtcgccgccggtgcgacgt
aaaaccgcctctccgagtctgaactga
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