Alienimonas californiensis: CA12_22280
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Entry
CA12_22280 CDS
T09792
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
acaf
Alienimonas californiensis
Brite
KEGG Orthology (KO) [BR:
acaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acaf03016
]
CA12_22280 (truB)
Enzymes [BR:
acaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CA12_22280 (truB)
Transfer RNA biogenesis [BR:
acaf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CA12_22280 (truB)
Prokaryotic type
CA12_22280 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QDT16130
UniProt:
A0A517P9S6
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All DBs
Position
complement(2783558..2784481)
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AA seq
307 aa
AA seq
DB search
MKPPPPIPPAGLLVLDKPAGASSRDAVNVVQRAARGAGWGRRVKVGHAGTLDPIASGVLV
VCVGKATRLIERVQALPKTYEAGFRLHVSSPSLDVEADPVPVPDPPTVTREQIEAALPRF
LGEIDQTPPAFSAVKVGGRRAYDLARQGEEVELEPKRVRVDRLEVLSFDGERLALRIVCG
SGFYVRSLGRDLAAALGTEAVMETLIRTRIGGFDLEGALEPTAVTEETLPGLLGLRFDRL
GLPTATCDDDQAIDLRAGRYAQLSFEAAPGEPGDCGVRDAAGKPVCVGVRDPDGTLRPRT
TFPLPTV
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgcctccgcccattccccccgccgggctgctcgtgctggacaaaccggccggg
gcgagcagccgcgacgccgtgaacgtcgtgcagcgggccgcccgcggggcgggctggggg
cgacgggtgaaggtcggccacgccgggacgctggacccgatcgcctccggcgtgctggtg
gtctgcgtcggtaaggcgacgcggctgatcgaacgcgtgcaggccctgcccaagacctac
gaagccggcttccgcctgcacgtctcctccccctcgctggacgtcgaggccgacccggtt
cccgtgccggacccgccgaccgtcacgcgggagcagatcgaagcggcgctcccccggttc
ctcggcgagatcgaccagacgccccccgccttcagcgcggtcaaggtgggcggccggcga
gcctacgacctcgcccggcagggagaagaggtggaactggagccaaagcgggtgcgggtc
gatcggctggaggtgttgagcttcgacggcgaacggctcgcgctgcggatcgtctgcggc
agcgggttctacgtccgcagcctcggccgcgatctggcggcggcgctgggcacggaggca
gtaatggaaacgctgatccgcacccgcatcggcgggttcgatctggagggggccctggaa
ccaacggccgtgacggaggagacgctgcccggcctgctcgggctgcgcttcgaccggctg
ggcctgcccacggcgacctgcgacgacgaccaggcgatcgacctccgggccggccgctac
gcccagctctcctttgaagcggcacccggcgaacccggcgactgcggcgtgcgggacgcc
gcggggaagccggtctgcgtgggcgtccgcgaccccgacggcacgctgcgaccgaggacg
accttccccctgccgacggtctga
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integrated database retrieval system
