Alienimonas californiensis: CA12_23920
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Entry
CA12_23920 CDS
T09792
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
acaf
Alienimonas californiensis
Brite
KEGG Orthology (KO) [BR:
acaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acaf03016
]
CA12_23920 (rnd)
Enzymes [BR:
acaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CA12_23920 (rnd)
Transfer RNA biogenesis [BR:
acaf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CA12_23920 (rnd)
BRITE hierarchy
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QDT16291
UniProt:
A0A517PA89
LinkDB
All DBs
Position
complement(2991801..2993114)
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AA seq
437 aa
AA seq
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MPRSRRSSRSDSRGDSARGAETSSSSPGGGFRRGVGTGGPADDDALITDQAEFDDFCQRA
RDARLVAFDTEFVSESTFRPELCLMQFSAAGETVGVDPFELTDLTPWWDLMTDDRTTVIV
HGGQAEVKFCLEATGQAPRRLVDVQLAEGLRSTSYPLGYDALVQRVLNVRAPKGSQTRTD
WRRRPLSADQLSYALRDAEFLPKIWEIQRKDLQERGRTAWAAAEFVRFVRSLAEDHRREP
HERLSGLSKLSRRDLAVAREVAIWRQAEAEEKNRPVRRILRDDLVIDIAKRQPETEEQLL
APRDMNRGDIRRSAEDLLAAIERGKAVSDDDLPERVRREGPDKNPDEHVLGQLLGIALSS
LCNEHEVARTIAGTAKDLRELVRWHTAGRPEGVEVPLLATGWRKELCGQLLTDLLDGEIA
MRVADAKGDHPLSFERG
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgccccgctcccgccgatcgtcccgttccgacagccgcggcgattcggcccgcggcgcc
gagacctcctcttcaagccccggcgggggcttccggcgcggcgtcggcaccggcggaccg
gcggacgacgacgccctcatcaccgatcaggcggagttcgacgacttctgccagcgggcc
cgcgacgcccgcctcgtcgctttcgatacggagttcgtctccgaatccaccttccgcccc
gaactgtgcctcatgcagttcagcgccgcgggggagaccgtcggcgtcgatccgtttgaa
ctgaccgatctcaccccctggtgggatctgatgaccgacgaccgcaccaccgtgatcgtg
cacggcgggcaggccgaggtgaagttctgcctggaggccaccggccaggcgccgcggcgg
ttggtcgacgtgcagctcgccgagggattgcggtccaccagctatccgctgggctacgac
gccctcgtgcagcgggtgctgaacgtgcgggcgccgaagggcagccagacccgcaccgac
tggcgccgccggccgctgtcggcggaccagctctcctacgccctgcgggatgcggagttc
ctgccgaaaatctgggagattcagcggaaggatctgcaggaacgcggtcgcaccgcctgg
gcggcggcggagttcgtgcggttcgtccgcagcctggccgaagatcatcgccgcgaaccg
cacgagcggctctccggcctgtcgaagctctcccgccgggacctcgccgtggcgcgggag
gtcgcgatctggcgccaggcggaagccgaggagaagaaccgcccggtccgccggattctg
cgggacgacctcgtcatcgacatcgccaagcggcagccggaaaccgaagagcaactgctc
gccccccgggacatgaaccggggcgacatccgccgcagcgccgaggacctcctcgccgcg
atcgagcggggcaaggcggtgtccgacgacgacctgcccgaacgcgtccgccgcgagggg
ccggacaagaacccggacgagcacgtgctaggccagctgctcggcatcgccctgagcagc
ctgtgcaacgagcacgaggtcgcccgcacgatcgccggcacggcgaaggacctgcgggaa
ctggtccgctggcacaccgccggccggccggagggcgtcgaggtcccgctgctggccacc
ggttggcgcaaggaactgtgcggccagttgctgaccgacctgctggacggcgagatcgcg
atgcgcgtcgccgacgccaagggcgaccacccgctgagcttcgagcgcgggtga
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