Alienimonas californiensis: CA12_32340
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Entry
CA12_32340 CDS
T09792
Name
(GenBank) Eukaryotic DNA topoisomerase I, catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acaf
Alienimonas californiensis
Brite
KEGG Orthology (KO) [BR:
acaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acaf03032
]
CA12_32340
03400 DNA repair and recombination proteins [BR:
acaf03400
]
CA12_32340
Enzymes [BR:
acaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CA12_32340
DNA replication proteins [BR:
acaf03032
]
Prokaryotic type
DNA Topoisomerases
CA12_32340
DNA repair and recombination proteins [BR:
acaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CA12_32340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QDT17122
UniProt:
A0A517PCN1
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All DBs
Position
4032967..4034037
Genome browser
AA seq
356 aa
AA seq
DB search
MSVRLIERAAVASIDAVEDPLRLAKRAGLHHLADDTPGIVRVRCGTGFTFRTPEGETLDR
TGEERARIDALAIPPAWEEVWVSPDPISHLQATGRDAAGRKQYLYHPSWATAAGEAKWLR
LAAFGAVLPRMRRRIRRDARRLRMDKRKACALAAGLLDAAAIRVGGADYTRDHQTYGLTT
LRPEHVVVRGGLIRLSFLGKHGVQRDVECRRRSLARSLKTLKAAGGDTLLKYRDGAGVWR
PLSSSKVNAYLSHAAAGKVTAKDFRTWHGARVAFEAALAGPADPKTDPVRAAVVAASEYL
GNTAAVCREYYVHPAVTEFAAEVANGARPPRPVRLRGLRRSERRLLALLRQYAAEE
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgtccgcctgatcgaacgcgccgcggttgcgtccatcgacgccgtcgaggacccg
ctccgcctggccaagcgggccggcctgcatcaccttgcagacgacacgccgggcatcgtc
cgcgttcgctgcggcacggggttcacctttcgcaccccggagggggagacgctcgaccga
accggcgaggagcgggcgcggatcgacgccctcgccattccccccgcctgggaggaggtc
tgggtctcgccagacccgatcagccacctccaggcgaccggtcgggacgcggcgggccgg
aagcagtacctctatcacccaagctgggcgaccgcggcgggcgaggcgaagtggctgcga
ctggccgccttcggagccgtgctgccgcggatgcgacgccgcatccgccgcgacgcccgc
cgcctgcggatggacaaacggaaagcttgcgccctcgccgccgggctgctggacgccgcc
gcgatccgcgtcggcggcgccgactacacccgcgatcatcagacgtacggcctgaccacg
ctccggccggagcacgtcgtcgtccgcggcgggctgatccggctgtcgttccttggcaag
cacggggtgcagcgggacgtggaatgccgccgccgttcgttggcccggtccctcaagacg
ctcaaggccgccggcggcgacaccctgctgaagtaccgcgacggcgccggcgtctggcgg
ccgctgagcagttccaaggtcaacgcctacctgtcgcacgccgccgccgggaaggtgacg
gcgaaagacttccgcacctggcacggcgcccgcgtcgccttcgaagcggcgctggccgga
ccggcggatccgaagaccgatcccgtgcgagccgcggtcgtggcggccagcgagtacctc
ggcaataccgccgccgtctgccgcgagtactacgtgcaccccgccgtcacggagttcgcg
gcggaggtggcgaacggcgcccgccccccgcggccggtgcgtctgcggggcctgcggcgg
tcggagcggcggttactggccctgcttcgtcaatacgcggcggaggagtga
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