Alienimonas californiensis: CA12_32500
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Entry
CA12_32500 CDS
T09792
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
acaf
Alienimonas californiensis
Pathway
acaf03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
acaf00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CA12_32500 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
acaf03011
]
CA12_32500 (rpsA)
Ribosome [BR:
acaf03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CA12_32500 (rpsA)
Bacteria
CA12_32500 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
PCB_OB
CvfB_2nd
RNase_II_C_S1
DUF7205
MRP-S35
Motif
Other DBs
NCBI-ProteinID:
QDT17138
UniProt:
A0A517PCM8
LinkDB
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Position
4057214..4058944
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AA seq
576 aa
AA seq
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MVDRNLFREFDVDDDALDDALGEDWEIPDELYVKEAVDPEQIVTGTVLRLNGDEVLIDIG
YKSEGVCLIDEWTEEEGYPKPGDQVEVLMEDLDESFGILLLSKRKADRIREWEAVTNEYG
EGDQVSGAILRKIKGGLLVDIGVHVFLPASQVDIRRPPSIDAWVGRDIECMILKVDENRR
NIVVSRRKLIEERRAKMKEELLARITEGDIVTGEVKNIADFGAFVDLGGIDGLLHITDMS
WGRIGHPTDMVSINDKIEVKILNIDRENEKIALGLKQKFPSPWDNIDEKYPVGTKVAGEV
VNVMTYGAFVKLEDGIEGLVHISEMSWTKRVNHPNELVHIGDEVDVVVLGINHTKQEISL
GMKQTQANPWDDILKKYPEGAKVSGTVRNLTNYGAFVELEEGIDGLLHVSDMSWTRKLTH
ANEMLQKGDRVTCEVLSVDEDRRRIALGLKQLDGDPWNTTIPEKFSPGSIHSGTVAKITN
FGAFVELEPELEGLLHVSELERAGKTPTVGEELDVRVLRVDSNDRKIGLSLKLDASEEEF
EQQVREAEELSTAQKNENLKGGTEDAGPLFAMPGQD
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatcggaacctgttccgcgagtttgacgtcgacgacgacgcgctcgacgacgcc
ctcggcgaagattgggaaattcccgacgagctgtacgtcaaagaagccgtcgatcccgaa
cagatcgtcaccggcaccgtgctccgcctgaacggcgacgaggtgctcatcgatatcggt
tacaagtccgagggcgtctgcctgatcgacgagtggaccgaggaagagggctaccctaag
cccggcgaccaggtcgaagtcctgatggaggacctcgacgagagcttcggcatcctgctg
ctctccaagcgcaaagcggaccgcatccgcgagtgggaagccgtcaccaacgagtacggc
gaaggcgaccaggtcagcggggcgatcctccgcaagatcaagggcggcctgctggtggac
atcggcgtccacgtgttcctgccggcctcgcaggtcgatatccgccgtccgcccagcatc
gacgcctgggtcggccgcgacatcgagtgcatgatcctcaaggtcgacgagaaccgccgc
aacatcgtcgtctcccgccggaagctcatcgaagagcgccgggcgaagatgaaggaagag
ctgctcgcccgcatcaccgagggcgacatcgtcaccggcgaggtcaagaacatcgccgac
ttcggcgcgttcgtggatttgggcgggatcgacgggctgcttcacatcaccgacatgtcc
tggggccgcatcggccacccgacggacatggtctcgatcaacgacaagatcgaggtgaag
atcctcaatatcgaccgcgagaacgagaagatcgcgctcgggttgaagcagaagttcccc
agcccgtgggacaacatcgacgagaagtaccccgtcggcaccaaggtcgccggcgaggtg
gtcaacgtgatgacctacggcgccttcgtgaagctggaagacgggatcgaggggctggtt
cacatctccgagatgtcttggaccaagcgggtcaaccacccgaacgaactggtccacatc
ggcgacgaagtggacgtggtggtgctcggcatcaaccacacgaagcaggaaatcagcctc
gggatgaagcagacccaggccaacccctgggacgacatcctcaagaagtacccggaaggg
gcgaaggtctccggcaccgtccggaacctcaccaactacggggccttcgtggagctggaa
gaggggatcgacgggctgctgcacgtctccgatatgtcgtggacgcggaagctcacccac
gccaacgagatgctgcagaagggcgatcgcgtcacctgcgaagtcctctccgtcgacgag
gatcgccgccggatcgcactggggctcaagcagctcgacggcgatccgtggaacacgacc
atcccggagaagttctccccggggtcgatccacagcggcaccgtggcgaagatcaccaac
ttcggcgccttcgtcgaactggagccggaactggaaggcctgctgcacgtctccgaactg
gagcgggccggcaagaccccgaccgtcggcgaggagctggacgtccgcgtgctgcgggtc
gattccaacgaccgcaagatcggcctgtccctgaagctggacgcctccgaggaggagttc
gagcagcaggtccgcgaggccgaggagctgtccacggcccagaagaacgagaacctgaag
ggcggcaccgaggacgcgggtccgctgttcgccatgcccggtcaggactaa
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