Alienimonas californiensis: CA12_33440
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Entry
CA12_33440 CDS
T09792
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
acaf
Alienimonas californiensis
Brite
KEGG Orthology (KO) [BR:
acaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acaf03400
]
CA12_33440 (addB)
Enzymes [BR:
acaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CA12_33440 (addB)
DNA repair and recombination proteins [BR:
acaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CA12_33440 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
PSD5
Motif
Other DBs
NCBI-ProteinID:
QDT17231
UniProt:
A0A517PD32
LinkDB
All DBs
Position
4164665..4168105
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AA seq
1146 aa
AA seq
DB search
MRLLCGTPRGGKTGALLAEYAAALQAAWAEGRTGACLWLTPNRLSRAAVQSDLAREIGGP
LLEPGVRTFENLTDELLSDGRLWHALDAAQGAPSREPAGGEGRRYRVLSGVSRRRVLRAV
IDAEAAAGRLSHFARIAGAGGFLTLLERQVRAWKYAEVWPDDPTLQSGGAARRDLVRLYA
AYQDRLQNPPDGGPPLFDAEGRVWVARNLLCGAGAALGSDGSGNGRRLDLLVADGFTSFT
ATQRDLLAALAASANAAVIALPLEQGSGMSAKPRPGVPYRPDLFEPVWRTVDELSDPLAE
QGGESIYQWHAPRRPDDALGHLAAWLFDESAEPAPRRTVAKGVTLYAAGRIEDEARATVA
AVKGLLMRGEPAERVVVTARDVGTYAEEFFRLCDAGGVPVDADRPLPLAGRPAVRALLAP
WRVEASGWGLRGLLGVLRDPSFGFPADAATATARVLRFANVGEDRRTALKAVRTFAPAAE
GEEPKPPDRDAPPEADRRLTAAAVEALNAALEPTRTATDPAGWVARLRTLIETLGFNPAA
AELPREPWEDDAADLDAALRWLSEAAAEHAADADPNHQADDGLLSLGEFLHWADELLAAA
RVPGPPAAAGGVAFVDAETARTAGCDHLFLLGLGEGQFPRPPNPADPAPPRSGEEADDPA
ALADANARAEMLLFYGVVTRPTKSLTLSWTTRDEKGRERFAGPFVEAVRDLFAPDTFPEP
KTASLSPIPALDRALTAADARALAVSELRTGGQAGPLARLLVTPGEAPAARCVLGAATML
SARSRTKGPTAFDGRLSTRSQVHWAKRRPVGYQFSASELETFAANPFRYFLDRVLRVERP
DPPGLREDRMNRGTAMHAALSRAYRRALEQSEDAPTVELLQEEIAALKPRSRSLARWHDG
LWETERALLAAWSEAFPTQAAAYAGTFAAGWAEGPTVHRLEAAFGRRTPEEEDDTEDLSQ
RPPAARFPNDPGGVPVTGRIDRLDFGFVTLESGETVPAYNIVDYKTGSSVPKFTAERVAA
GASLQLALYAVAARRCGLTPPDAEPHMLVYWGVKTEGPRNGISRGGKKCVAELLPTLEED
LDAVVPLLAGAIRSGVFPICPEKGETQTFSDHARVGRAAEVRAVAERLEKWPPPWRTGPV
VGDEDE
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtttgctgtgcggcacgccgcggggcgggaagaccggggccctgctggccgagtac
gccgccgccctgcaggccgcgtgggccgagggccgcaccggggcctgcctgtggctcacc
ccgaaccgccttagccgggcggcggtgcaaagcgatctggcccgcgagatcggcgggccg
ttgctcgagccgggggtgcgaaccttcgaaaacctgacggacgaactgctctccgacggc
cggctgtggcacgccctcgacgcggcccagggcgccccgtcacgagaaccggcggggggc
gagggtcgccgctaccgcgtgctctccggagtctcccgccgacgggtgttgcgggcggtg
atcgacgcggaggccgccgccggccggctgtcgcactttgcccgcatcgccggggccggc
gggttcctcacgctgctcgaacgccaggtgcgggcctggaagtacgcggaggtctggccg
gacgatcccaccctgcaatccggcggcgcggcccggcgggacctggtgcggctgtacgcg
gcctatcaggatcgcctgcagaacccgccggacggcggcccgccgctgttcgacgccgag
ggccgcgtctgggtcgcccgcaatctgctgtgcggcgccggggcggcgctcggctccgac
gggtcgggaaacgggcggcggctcgatctgctggtcgccgacggcttcacgagtttcacc
gccacccagcgcgacctgctggccgcgctggcggcctccgcgaacgcggccgtgatcgcc
ctgccgctggagcagggctccggcatgtcggccaaaccccgacccggcgtcccgtaccgg
ccggacctgttcgagccggtctggcggaccgtcgacgaactctccgacccgctcgcggag
cagggcggcgagtcgatctaccagtggcacgccccccgccggccggacgacgcgttgggg
catctcgcggcgtggctgttcgacgaatccgccgaaccggccccgcggcggaccgtcgcc
aagggcgtcaccctgtacgccgccgggcggatcgaggacgaggcgcgggcgacggtcgcc
gcggtgaagggcctgctgatgcggggcgaaccggcggagcgggtggttgtcacggcccgg
gacgtggggacttacgccgaggaattcttccgcctctgcgacgccggcggggtgccggtg
gacgcggaccgcccgctgccgctggccggtcggccggcggtgcgggcgctgctggccccg
tggcgggtcgaggcctccggctgggggctgcggggactgctgggcgtgctccgcgacccc
tcgttcggcttccccgccgacgccgccaccgcgacggcccgcgtcctgcggtttgccaac
gtgggggaggaccgccgcacggcgctcaaggcagtgcgcaccttcgcccccgctgccgag
ggcgaggaaccgaaaccgcccgaccgcgacgcccccccggaggctgatcgccggctgacg
gcggccgccgtggaggcgttgaacgccgcactcgaaccgacccgcaccgcgacggacccg
gccggctgggtggcgcggttgcgcaccctcatcgagaccctggggttcaatcctgccgcc
gccgagttgccgcgggagccgtgggaggacgacgccgccgacctcgacgccgccctccgc
tggctgagcgaagccgccgccgagcacgccgccgacgcggacccaaaccaccaggcggac
gacgggctgctctcgctgggcgagttcctgcactgggcggacgaactgctggccgcggcc
cgcgtgccgggcccgccggcggcggcgggcggcgtggcattcgtcgatgccgagacggcc
cgcacggcggggtgcgatcacctctttctgcttggtctgggcgagggccagttcccccgg
ccgccgaaccccgccgacccggcgccgccgcggtccggggaggaggcggacgatcccgcg
gccctggccgacgccaacgcccgggcggagatgctgctgttctacggcgtcgtcacccgg
ccgacgaaatcgctgacgctctcctggacgacccgggacgagaagggccgcgaacgcttc
gccgggccgttcgtggaggcggtccgcgatctgttcgccccggatacgttcccggagccg
aagaccgccagcctctcgccgatcccggcgctcgaccgcgcgctgaccgccgcggacgcc
cgggcgctggccgtgtcggagctacgcaccggcgggcaggcggggccgctggcccggttg
ctcgtcactccgggagaggccccggccgcccgctgcgtgctgggcgccgcgacgatgctc
tccgcccgcagtcggacgaaggggccgacggcgttcgacgggcggctctcgacgcggtcc
caagtccattgggcgaagcggcgaccggtcggctaccagttcagcgccagcgaactcgaa
acgttcgccgcgaacccgttccgctacttcctcgaccgcgtgttgcgggtggaacggccc
gacccgccggggctgcgggaggatcggatgaaccgcggcaccgccatgcacgcggccctc
tcccgggcctaccggcgggcgttggagcagtccgaggacgctccgaccgtggagctgctc
caggaagaaatcgccgccctgaagccgcggtctcgctcgctggcccgctggcacgacggg
ctgtgggagacggaacgcgccctgctggcggcgtggtccgaggcgttccccacgcaggcg
gccgcctacgccgggaccttcgccgccggctgggccgaggggccgacggtgcatcggctc
gaagccgccttcggccgccgcaccccggaggaggaggacgacacggaggacctgtcgcag
cgccccccagccgcccgcttcccgaacgaccccggcggggtgcccgtcaccggccgcatc
gaccggctggacttcgggttcgtgacgttggagtccggggagactgtcccggcgtacaac
atcgtggactacaagacgggttcgtccgtgcccaagttcaccgcggagcgggtcgccgcg
ggggcgtccctacagttggccctctacgccgtcgctgcccgccgctgcgggctgacgccc
ccggacgcggagccgcacatgctggtgtattggggtgtgaagacggaggggccgcggaac
ggcatctcccgcggcggcaagaagtgcgtcgccgagttgctgcccaccttagaggaggac
ctcgacgccgtggtgcccctgctggcgggggcgatccgcagcggggtcttcccgatctgc
ccggagaagggcgagacgcagacgttctccgatcacgcccgcgtcggccgagccgcggag
gtgcgggccgtcgcggagcggctcgaaaagtggcccccgccgtggcggaccggcccggtt
gtgggggacgaggatgagtga
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