Alienimonas californiensis: CA12_40490
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Entry
CA12_40490 CDS
T09792
Symbol
groL_3
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
acaf
Alienimonas californiensis
Pathway
acaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CA12_40490 (groL_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acaf03019
]
CA12_40490 (groL_3)
03110 Chaperones and folding catalysts [BR:
acaf03110
]
CA12_40490 (groL_3)
03029 Mitochondrial biogenesis [BR:
acaf03029
]
CA12_40490 (groL_3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acaf04147
]
CA12_40490 (groL_3)
Enzymes [BR:
acaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CA12_40490 (groL_3)
Messenger RNA biogenesis [BR:
acaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CA12_40490 (groL_3)
Chaperones and folding catalysts [BR:
acaf03110
]
Heat shock proteins
HSP60 / Chaperonin
CA12_40490 (groL_3)
Mitochondrial biogenesis [BR:
acaf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CA12_40490 (groL_3)
Exosome [BR:
acaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CA12_40490 (groL_3)
Exosomal proteins of other body fluids (saliva and urine)
CA12_40490 (groL_3)
Exosomal proteins of breast cancer cells
CA12_40490 (groL_3)
Exosomal proteins of colorectal cancer cells
CA12_40490 (groL_3)
Exosomal proteins of bladder cancer cells
CA12_40490 (groL_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QDT17911
UniProt:
A0A517PEV3
LinkDB
All DBs
Position
5041384..5043000
Genome browser
AA seq
538 aa
AA seq
DB search
MAKMIAFDQEAQEAMRRGVGKLARAVKVTLGPKGRNVILEKSFGSPTVTKDGVTVAKEIE
LPDKFEDMGARMVKEVASRTSDNAGDGTTTATVMAEAIYNEGLKAVVSGVSPIEMKRGMD
QAVEDIVAKLKSMSIEARDSKSIAQVGTVASNGDTEIGSIISKAMEAVGNDGVLTVEEGK
SLETTFDVVEGMQFDRGYLSPYFVTDRQAMEVMLEDPYILVHEKKISNIRDLVPVLEKVV
QSGKGLLIIAEDVEGEALATLVINNLRGTFKVAAVKAPGYGDRRKAMLQDIAVMVGGTAI
FEDLGIKLENLQLSDLGTCKKVVVDKDNTTLIEGGGKSADIKARIEQIRRELENSSSDYD
REKLEERVAKLAGGVAQVNVGAATESEMKEKKARVEDALHATRAAVEEGILPGGGVALLR
ASSQVKPGKKEGHDFGTGYQIILRACRAPLTQISNNAGKDGAVVCEKVLAQEGNFGYNAA
TDVYEDMVKAGIIDPAKVTRTALQNAASVSTLLLTSEALIAEKPAKGKGGGMSGEDLY
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatgatcgcgttcgaccaggaagcccaggaagccatgcgccgcggcgtcggc
aagctggcccgggccgtgaaggtcaccctcggccccaagggccgcaacgtcatcctggag
aagtccttcggctccccgaccgtcaccaaggacggcgtgaccgtggccaaggagatcgag
ctgccggacaagtttgaggacatgggcgcccgcatggtcaaggaggtcgcctcccgcacc
agcgacaacgccggcgacgggaccaccaccgccacggtgatggccgaggcgatctataac
gaaggcctcaaggccgtcgtctccggcgtctccccgatcgagatgaagcggggcatggat
caggcggtcgaggacatcgtcgccaagctcaagtcgatgagcatcgaagcccgcgacagc
aaaagcatcgcccaggtcggcaccgtcgccagcaacggcgacaccgagatcggcagcatc
atctccaaggcgatggaagcggtcggcaacgacggcgtactgaccgtcgaggaaggcaag
agcctggagaccaccttcgacgtcgtcgagggcatgcagttcgaccgcggctacctcagc
ccctacttcgtcaccgaccggcaggcgatggaagtgatgctggaggacccgtacatcctc
gtgcatgaaaagaagatctccaatatccgcgacctggtcccggtgctggagaaggtcgtc
cagagcggcaagggcctgctgatcatcgccgaggacgtcgagggcgaagccctcgccacc
ctcgtgatcaacaacctgcggggcaccttcaaggtcgccgccgtgaaggcccccggctac
ggcgatcgccgtaaggccatgctgcaggacatcgccgtgatggtcggcggcaccgcgatc
ttcgaggacctcggcatcaagctggagaacctccagctctccgacctcggtacctgcaag
aaggtcgtcgtcgataaggacaacaccaccctgatcgagggcggcggcaagagcgccgac
atcaaggctcggatcgagcagatccgccgcgagctggagaactccagcagcgattacgac
cgcgagaagctcgaggaacgcgtcgccaagctggccggcggcgtcgcccaggtgaacgtc
ggcgccgcgaccgagtccgagatgaaggagaagaaggcccgcgtcgaggacgccctgcac
gccacccgggcggccgtcgaggaaggcatcctgccgggcggcggcgtcgcccttctccgg
gccagctcgcaggtcaagccgggtaagaaggaaggccacgacttcggcaccggctaccag
atcatcctccgcgcctgccgggccccgctgacgcagatctccaacaacgccggcaaggac
ggcgcggtggtctgcgagaaggttctcgctcaggaaggcaacttcggctacaacgccgcg
accgacgtctacgaagacatggtcaaggccggcatcatcgacccggccaaggtcacccgg
actgccctgcagaacgccgcctccgtcagcaccctgctgctgaccagcgaggcgttgatc
gccgagaagcccgccaagggcaagggcggcggcatgagcggcgaagacctctactga
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