Thermaerobacillus caldiproteolyticus: ISX45_00565
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Entry
ISX45_00565 CDS
T06899
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
acai
Thermaerobacillus caldiproteolyticus
Brite
KEGG Orthology (KO) [BR:
acai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acai03019
]
ISX45_00565 (yhaM)
Messenger RNA biogenesis [BR:
acai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ISX45_00565 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
HDOD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QPA31557
LinkDB
All DBs
Position
105592..106539
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AA seq
315 aa
AA seq
DB search
MAKGIIHYEVGEQVDVYLLIKSVTKGIASNGKPFLTLILQDKTGEIEAKLWDASPEDESV
YVPESIVKVFGDISNYRGRTQLKIRNIRPVHQNDPVRVTDFLEVAPLKRDDMMEKITQYI
FEMKNPNIQRITRHLLKKYEQRFFDYPAATKNHHEFISGLAYHVVSMLDLAKAIANLYPS
LDKDLLYAGVILHDLGKVIELSGPVSTSYTLEGNLLGHISIMVSEISKAAEHLGITGEEV
VVLQHMVLSHHGKAEWGSPKPPMIKEAEILHYIDNLDAKMNMMDRALEKVKPGEFTERIF
ALDNRSFYKPTFSQS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaaggcattattcattatgaagtcggcgaacaagtcgatgtatatttgcttatt
aaatcagtgacaaaaggaattgccagtaacgggaaaccgtttttaactcttatattacaa
gacaaaactggggaaatcgaggcaaagttatgggacgcctctccagaggatgaaagtgta
tatgtaccggaaagtattgtgaaagtattcggagatattagcaattatcgcggacgtacg
caattgaaaattcgcaacattcgtcccgttcatcagaacgaccctgtgcgcgtcaccgat
tttcttgaagtcgcgccgttgaagcgggatgatatgatggaaaaaattactcagtacatt
ttcgaaatgaaaaacccgaacattcaacgcattacaagacatttattaaaaaaatacgaa
caaagatttttcgactatccagcagcgacaaaaaaccatcacgaatttatttccggtttg
gcgtaccatgtcgtgtccatgcttgatttagccaaagcgattgccaatctttatccgtcg
ttggataaagacttattatacgccggcgtgattttgcacgatctcggcaaagtcatcgaa
ctatcgggaccagtttcgacgtcgtatacgcttgaagggaatttgcttggacatatttcg
attatggtcagtgaaatcagtaaagcagctgagcatcttgggattaccggagaagaagtc
gtcgtattgcaacatatggtcctaagccatcatggcaaggcagagtgggggagcccgaag
ccgccgatgattaaagaggcggaaattcttcattacattgacaatttagatgcgaaaatg
aatatgatggaccgcgctttggaaaaagtgaaaccgggcgaatttacagaacgaattttt
gcgcttgataatcgctcgttttataaaccgacattttctcagtcataa
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