Thermaerobacillus caldiproteolyticus: ISX45_01085
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Entry
ISX45_01085 CDS
T06899
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
acai
Thermaerobacillus caldiproteolyticus
Brite
KEGG Orthology (KO) [BR:
acai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acai03400
]
ISX45_01085 (addA)
Enzymes [BR:
acai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ISX45_01085 (addA)
DNA repair and recombination proteins [BR:
acai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ISX45_01085 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_22
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QPA31645
LinkDB
All DBs
Position
198188..201940
Genome browser
AA seq
1250 aa
AA seq
DB search
MNRQIRPKPEGSQWTDEQWKAIVEDGRHILVAAAAGSGKTAVLVERIIEKIVAEDDPIDV
DRLLVVTFTNASAAEMKTRIAEAIEREIEKHPSSLHLRRQLSLLNRASISTIHAFCLDVI
RKYYYLIDIDPVFRIADDTEVELLKDEVMEELLEEQYGKEENEQFFQVVDRYTGDRSDED
LQEMILTIYEFSRSHPDPFRWLDRLVDMYDIGTEMKLEQLPYIAHLQRYIDMELAAVKRL
LTRALEVAQLPGGPLPRVENFRDDLQIIARLEEAKARSWNELYEQMHAFSFSRAKPCRGD
EYKQELIDEAAALREQAKKKLENIRDDIFSLRPDTWLRHICEMKPIVETVVQLVKQFTER
FQQAKRERGLVDFSDLEHYCLQILRHPDSTEEQLIPSEAALDYRAQFAEVLIDEYQDVNM
VQEAILQLVTKGNEQFGNLFMVGDVKQSIYRFRLAEPFLFLSKYKRFTADGETAGMKIDL
SRNFRSRAGILDGTNFIFKQIMGETVGEIVYDEEAELKLGASDYPESEHVATELIVIDRN
SGGIEEAETEEEGFNRNELAAAQLEARMMANKIKELIAGSFEVYDRKAKRMRRVMYRDIV
ILLRSMSSAPQMIEEFRAQGIPVYADLSSGYFQATEVSVMLSLLKIIDNPYQDIPLAAVL
RSPIVGLNENELALIRLHERKGTYYEALLSFINKAADNAEEKALQKTLRQFYEHLQQWRT
RARQGSLADLIWQLYRDTHFYDFVGGMPGGKQRQANLRALYDRARQYEATSFRGLFRFLR
FIERMQNRGDDLGAARALGEQEDVVRLMTIHSSKGLEFPIVFVAGLARSFNMQDVNKPYL
LDKELGFATRFVDPKLRISYPTLPQIALKKKLRLDLLAEEMRILYVALTRAKEKLYLVAV
VKNAEKEMAKWKNDITAEQWLLSDDVRASASCYLDWIGRALIRHRDAQHLWEHSFVVSEE
IKNHPSKWNIEIVGAEQLYEIDVAKEQIDAEIMRAIQNMKPVSQTSDYKQQVNRQLTWEY
EYKQETIVRAKQTVSELKRQRDIFAEHADRTLLRSLSNPIFERPRFMQAKKLTPAERGTA
MHMVMQHVDVTRPITEETIREQVAKMVHIELLTHEQANAIDVSSVVAFFTTDVGKRLCQA
RNIYREVPFSLAMSAQDVYGQSYASEDGYVLVQGVIDCLFEDDDGLVLIDFKTDTVTGRF
QGGWEEAKQVMKSRYEAQVNLYRRAVEQIWKTNVHECYLYVFDGSHLLPM
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgaatagacaaatccgtccgaaaccggaaggaagccagtggaccgatgaacaatggaaa
gcgatcgtagaggatggacggcatattttagttgctgctgcggctgggtctggaaaaacg
gcagtgctagtcgaacggattatcgaaaaaattgttgccgaagacgaccctattgatgtt
gatcgtctgcttgttgtgacgtttaccaacgcttcagcagcggaaatgaagacacgaatt
gctgaggcaattgaaagagaaatcgaaaaacatccgagttctctacatttaagacgacaa
ctcagcctgttaaatcgtgcatccatttcgacgatccatgcattttgcttggacgtcatt
cgcaaatattactacctcattgacattgatcctgtgtttcgcattgccgatgatacggaa
gtggaactgttaaaagatgaagtgatggaagaactgttagaggaacagtacggaaaagag
gaaaatgaacagttttttcaggtcgttgaccgctatacaggcgatcggagcgatgaggat
ttacaggagatgatcttaacgatttacgagttttctcgctctcaccccgatccgttccgt
tggctcgatcggcttgttgatatgtatgatattggtacggaaatgaagcttgagcagctg
ccatatatcgcgcatttacaacggtatatcgatatggagctggcagcggtaaaacggttg
ctgacaagggcgcttgaggtggcgcagctgccagggggaccgctgccgcgtgtggaaaac
ttccgcgacgatttacaaattattgcaagattagaggaagcgaaggctcgctcttggaat
gagttatatgagcaaatgcacgcgttttcgttctcgcgtgcaaagccgtgtcgcggcgac
gagtataaacaggaactgattgatgaagcagctgctttgcgcgaacaggcgaagaaaaaa
ttggaaaatattcgtgatgacatcttttcacttcgcccagatacatggcttcggcacata
tgcgaaatgaagccgatcgtcgaaacggttgttcaacttgtgaagcaatttacggaacga
tttcaacaggcgaagcgagaaagaggattggtggatttttctgacttagaacactactgt
ttacaaattttacgacatcctgactctacggaagaacaacttattccttcagaggcggcg
cttgattatcgtgcgcaatttgccgaggtgcttattgacgagtatcaagatgtgaacatg
gtgcaagaagcaattttacagcttgtcactaaagggaatgagcagttcgggaatttattt
atggtcggtgacgtcaaacagtcgatttaccgtttccgtttagctgagccgtttttattt
ttaagcaaatataaacggtttacagctgatggcgaaacggcgggaatgaaaattgattta
tcgcgtaacttccgaagtcgcgccgggattcttgacggaacgaactttatttttaaacaa
attatgggagaaaccgttggcgaaattgtttatgacgaagaggcagaactgaaattaggt
gcaagtgattatccagagagtgaacatgttgcaacagaactcattgtcattgatcgcaac
agcggtggaatcgaagaagcggaaacggaagaagagggatttaacagaaatgaacttgct
gcagcacagctagaggcacggatgatggccaacaaaattaaagagctcattgccggatca
tttgaagtctacgatcgcaaggcaaaacgaatgcgccgtgtcatgtatcgcgatatcgtc
atcttactgcgctcaatgtcgtcagcaccgcagatgattgaagagtttcgagcccaagga
attcctgtatatgcggatctttcatcaggatattttcaagcgactgaagtatcggtgatg
ctatcattgttgaaaattattgacaatccttaccaagacattccgcttgcagcggtgctg
cgctcgccgattgtcggtttgaatgaaaatgaattggcgctcatccgccttcatgaaaga
aaaggaacgtattacgaagcacttctctcgtttattaacaaagcagctgataatgcagag
gaaaaagcgctgcaaaagacgttgcggcaattttacgaacacctgcaacaatggcgaacg
agagcgcgacaaggttcgttagccgatttaatttggcagctgtatcgagatacacatttt
tacgattttgtcggcggtatgcccggcggaaaacaacgccaagcgaatttacgcgctctt
tatgaccgggcgcggcaatacgaagcgacctcttttcgcggcttatttcgattcttacgc
tttattgaacggatgcaaaaccgcggcgacgatttaggagcggcgcgtgcgctcggtgaa
caagaagatgtcgttcggttgatgacgattcacagcagcaaaggtctcgaatttccgatt
gtctttgttgccggattggcgcgttcgtttaatatgcaagatgtgaacaagccatatttg
ctggacaaagaactaggatttgcgacgcgatttgttgatccgaagttgcgcattagttat
ccgacgttgccgcaaattgccctaaagaaaaaattgcgtctcgatttattggcggaagaa
atgagaatcctttatgtcgccttaacgcgtgcgaaagaaaagttatacttagttgccgtg
gtaaaaaatgccgagaaagaaatggcgaaatggaaaaacgacattacggcggaacaatgg
cttctttccgatgatgttcgtgcctcggcaagctgctatttagattggataggccgtgcg
ctcattcgccatcgcgatgctcaacatttatgggaacattcctttgtcgtatcggaagaa
attaagaatcatccatcaaaatggaatatcgagattgtcggtgcagagcaattatatgaa
attgatgtagcgaaagaacagattgatgcggaaatcatgagagcgattcaaaatatgaag
cctgtttcacaaacgagtgactataagcagcaagtgaatcgtcaacttacatgggagtac
gagtacaaacaggaaacgattgttcgtgcgaaacagacggtgtctgaattaaagcggcaa
cgagacatttttgcggaacatgccgatcgtacgcttcttcgctcactttccaatccgatt
tttgaacggccacggtttatgcaggcgaaaaagctaacaccagcggagcgcggtacagcc
atgcatatggtcatgcagcatgtggatgttacccgaccgattacggaagagacgattcgg
gagcaagtcgcaaaaatggtccatatcgaattgttaacgcatgaacaggcaaatgccatt
gatgtttcgagtgtggttgccttttttactaccgatgttggaaaacgtttatgccaagct
cggaatatttatcgcgaagttccgtttagcttagcaatgtcggcgcaggacgtgtacggg
caatcatacgcaagtgaagacgggtacgtccttgttcaaggggttatcgattgtttattc
gaggacgacgacggacttgtattaatcgattttaaaacggatacggtgacagggcgcttt
caaggcggttgggaagaggcaaaacaagtgatgaaatctcgctacgaagcgcaagtgaac
ctatatcgtcgcgccgttgaacaaatttggaaaacgaacgtccatgaatgttatttatat
gtatttgatggttcacatcttcttccaatgtga
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