Thermaerobacillus caldiproteolyticus: ISX45_10585
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Entry
ISX45_10585 CDS
T06899
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
acai
Thermaerobacillus caldiproteolyticus
Brite
KEGG Orthology (KO) [BR:
acai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acai03019
]
ISX45_10585
03009 Ribosome biogenesis [BR:
acai03009
]
ISX45_10585
Enzymes [BR:
acai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ISX45_10585
Messenger RNA biogenesis [BR:
acai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ISX45_10585
Ribosome biogenesis [BR:
acai03009
]
Prokaryotic type
rRNA helicases
ISX45_10585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Flavi_DEAD
Mis12
DUF7117
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
QPA30099
LinkDB
All DBs
Position
complement(2113028..2114335)
Genome browser
AA seq
435 aa
AA seq
DB search
MKETLFERFSFQPFLIEAIKELNFYKPTEIQERLIPSILRGESAIGQSQTGTGKTHAYLL
PIIEKIDPHRLEVQAVITAPTRELATQIYHEILKITKFCPSDHQIVARCFVGGTDKQKAM
EKLKKQPHIVVGTPGRINDFIREQVLFVHTASMLVVDEADMMLDMGFIVDVDQIAARMPK
DLQMLVFSATIPEKLKPFLRKYMENPKYVHVAPKQVTAEKIEHILVPLRHRDKLNLLHDM
LISYNPYLAIVFTNTKKMADEIVDALSEKGLKVGVLHGDLTPRERKRMMKQIRDLEFQYI
VATDLAARGIDIQGVSHVINYELPHDLEFYVHRVGRTARAGYTGIATTIYEPSDQDALTK
LEKMGIDFLHRDLVRREWVELPPWNQRKKREKTDEELEQLVNKLKKTKKVKPGYKKKLKE
EIEKQKKRLRRLKKK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggaaacattatttgagaggttttcatttcaaccttttctcatagaggcgattaaa
gaactcaatttttataaaccgacagaaattcaagagcggctcattccgagtatccttcgc
ggtgagagcgccatcggtcaatcgcagacaggaacgggaaaaacgcatgcgtatttattg
ccgattattgaaaaaatcgacccgcaccgtttggaagtgcaggcagtgatcaccgctccg
acgcgagagcttgccacacaaatttaccatgaaatactaaaaattacaaagttttgtcca
agtgatcatcaaattgtggcacgttgctttgttggaggaacagataaacaaaaggcgatg
gaaaagctgaaaaagcagccgcatattgttgtggggacgccgggaagaattaatgatttt
attcgcgaacaagtgctttttgttcatacagcctcaatgctcgttgtcgatgaggcagat
atgatgttagatatgggctttattgttgatgtcgatcaaattgctgcaagaatgccgaaa
gatttacaaatgttagtgttttcagcaacaattccggaaaaattaaaaccgtttttgaga
aagtatatggaaaacccaaaatatgttcatgttgctccgaagcaagtcacagcggaaaag
attgaacatattcttgtgccactccgtcaccgcgataaattgaatttgttgcatgacatg
cttatttcgtataatccgtatttagcaattgtgtttacgaatacgaaaaaaatggctgat
gaaatagtggacgcgctaagcgaaaaaggattgaaagtcggagttttacacggtgattta
acgccacgagagcggaaaagaatgatgaagcaaattcgtgatctagagtttcaatatatt
gtcgcaacggatttagctgcgcgaggcattgatattcaaggagtgagccacgttattaac
tatgaactgccgcacgatttagaattttatgtgcatcgcgttggacgtacagcacgtgca
ggctacacaggaattgccaccaccatttacgaaccatccgaccaagatgcgctaacgaaa
ctggagaaaatgggaattgattttcttcatcgtgatcttgtgcgcagagaatgggttgag
cttccgccatggaaccagcgaaaaaagcgcgaaaaaacagatgaagagctcgagcaactt
gtcaacaagttgaaaaaaacgaaaaaggtaaaaccgggttataagaaaaagctaaaagaa
gaaattgaaaaacagaaaaaacggttgcgtcgcttaaagaaaaaataa
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