Thermaerobacillus caldiproteolyticus: ISX45_10785
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Entry
ISX45_10785 CDS
T06899
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
acai
Thermaerobacillus caldiproteolyticus
Pathway
acai03030
DNA replication
acai03430
Mismatch repair
acai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ISX45_10785 (holA)
03430 Mismatch repair
ISX45_10785 (holA)
03440 Homologous recombination
ISX45_10785 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acai03032
]
ISX45_10785 (holA)
03400 DNA repair and recombination proteins [BR:
acai03400
]
ISX45_10785 (holA)
Enzymes [BR:
acai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ISX45_10785 (holA)
DNA replication proteins [BR:
acai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ISX45_10785 (holA)
DNA repair and recombination proteins [BR:
acai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ISX45_10785 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DUF3479
RE_NgoPII
Motif
Other DBs
NCBI-ProteinID:
QPA30135
LinkDB
All DBs
Position
complement(2149978..2151003)
Genome browser
AA seq
341 aa
AA seq
DB search
MVVDFWGKINKQHLSSLYLLYGTESFLLNETYERIIRIVLSEEEREFNLSIYDCEETPVE
AAIEDAETLPFFGEKRVVLIKNPYFLTAEKGKEKIEHNLKKIEAYIASPSPFSVVIFAGL
YEKLDERKKLTKLLLNNAEVFVASSLNENELREWMRERLQNHGVVMDEEAMETLLQLAGT
NVMSLANELDKLALFVGQGGTVTKETVEILVSRTLEQNVFALVEKVIQRDMADALRVFYD
LLELNEEPIKILALLASQFRLLYQVKDLAAKGYGQQHIASLLKVHPFRVKLAMSQASLFS
EQELMRMIHDIAEADYQMKSGGMDKRLIIELLLIKWGKERK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggtggttgacttttggggaaaaataaacaaacaacatttatcttccctctacttatta
tatggaacagagtcgtttttattaaatgaaacatatgaacgaatcattcgcatcgtttta
agtgaggaagaacgagaatttaatttatccatctatgattgcgaagaaacgccggtagaa
gcagcgatagaagatgccgaaacgcttccgttttttggagaaaagcgggtagtactaata
aaaaatccttattttttaacagctgaaaaaggaaaagaaaaaattgagcataatctcaaa
aaaatagaagcgtacatagcttctccatcacctttttctgtcgtgatttttgccggcttg
tacgaaaaattagatgagagaaaaaaactaacaaagctgttgttgaacaatgcagaagtg
tttgttgcctcctcattgaatgaaaacgagttgcgtgaatggatgagggagcgactgcaa
aatcatggagtagtcatggatgaagaagctatggagacattgctgcaactggcaggaacg
aatgtgatgtcgctggcaaatgagcttgacaaactagcgctgtttgttggacaaggggga
acagtgacaaaagagacggtggagatacttgtttcccgcacgcttgaacaaaacgtgttt
gcgttagtggaaaaagtcatccagcgcgatatggctgatgcgctgcgagttttttacgat
ttgcttgaactcaacgaagaaccaatcaaaattttagcgttgcttgcaagccagtttcgc
cttttatatcaagtaaaagatcttgccgcaaaagggtatgggcagcagcatatcgcttct
ttgttaaaagttcatccgtttcgtgtcaaactggcgatgagtcaagcctctttattttcc
gaacaagaactcatgcggatgattcacgatattgctgaggcggattatcagatgaaaagc
gggggaatggataaacgtttaatcatcgaactattattgatcaaatggggcaaagagcgt
aagtaa
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