Thermaerobacillus caldiproteolyticus: ISX45_11145
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Entry
ISX45_11145 CDS
T06899
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
acai
Thermaerobacillus caldiproteolyticus
Pathway
acai03410
Base excision repair
acai03430
Mismatch repair
acai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ISX45_11145 (recJ)
03430 Mismatch repair
ISX45_11145 (recJ)
03440 Homologous recombination
ISX45_11145 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acai03400
]
ISX45_11145 (recJ)
DNA repair and recombination proteins [BR:
acai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ISX45_11145 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ISX45_11145 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ISX45_11145 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
BBS2_hp
Motif
Other DBs
NCBI-ProteinID:
QPA30199
LinkDB
All DBs
Position
complement(2222711..2225068)
Genome browser
AA seq
785 aa
AA seq
DB search
MLTAKTRWDVKHPDVDKSNELAKQLNIAPLVASLLVNRGVDTVKEAEVFLSPMKQPFHDP
FLLDGMEQAVARIQQAVQSNERILVFGDYDADGVSSTTVMVSALKEIGAIVDFYIPNRFT
EGYGPNKKAFCWAKEQGFSLIITVDTGIAAIDEVALANELGIDVIITDHHEPGPTLPDAY
AIIHPKKPGSTYPFRELAGVGVAFKVAHALLGDVPRHLLDVVAIGTIADLVSLTGENRLL
VAQGLEQLQATTRIGLQALLKQCGIQTKELNEETIGFVIAPRINAVGRLGGADPAVRLLM
TEDQDEARMLAKEMDELNRERQRLVAEMAEEAAQMVNEQFPPSEHKVLVVAKEGWNPGVV
GIVASRLVEQFYRPTIVLSLDPEKGIAKGSARSIHGFDIFTQLSACRDILPHFGGHPMAA
GMTLSIEHVDELRQRLNTLANDILTDDDFIPMTTIDVKCSVSDLTLTAAEQLQKLAPFGV
DNPKPLILIEDVSIQTIRRIGADQSHVKAVFEQDGATIESVGFGYGYLYDEIAPDAKVSV
VGELSINEWNHIRKPQLMLCDVAVHECQLFDIRGMRHVHPLFSSLPREKRLFIAFHEETI
EALQLHDYREEICYLSSLKEAEQLHIADRYVVLLDLPPSLEMMKVLLCSSLPARIYALFY
QRETHFFSTLPTRDHFKWFYAFLRKRGIFDLAKYGDELARARGWTKETVHFMVKVFLELE
FITLKDGMVSLVHEPAKRDLTESPTYRLKQAQFELEKLFLYSSYQQLKRFLFEMKGSRTY
EEANV
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgttaaccgcgaaaactcgctgggatgtaaaacatcctgatgttgataaaagcaatgaa
ttggcaaaacaattaaatatcgctccacttgttgcttcattgcttgtaaatcgaggggta
gatacggtaaaagaagcagaggtatttttatctccgatgaaacaaccgtttcatgatccg
tttttacttgatggaatggagcaagcagtggcgcgtattcagcaagcggtccaaagcaat
gagcgcattcttgtctttggcgattacgatgccgatggtgtgagcagcacaaccgtaatg
gtcagtgctcttaaagaaatcggtgctatcgttgatttttatattccgaatcgctttacg
gaagggtacggaccgaataaaaaagcgttctgttgggcgaaagaacaaggattttcttta
atcattacagtcgatacgggcattgccgcaattgatgaagtcgcattagcgaacgagctt
ggaattgatgtaatcattaccgatcaccatgaacccggaccaacgttaccggatgcgtat
gcgattattcatccgaaaaaacccggaagtacatatccatttcgtgaactggcaggcgtt
ggagtcgccttcaaggtggcgcacgcgttacttggggatgtgcctcgtcatttactcgat
gttgtcgctatcggcactatagccgatctcgtttctcttacgggagaaaatcgtctatta
gtcgcacaagggttagagcagttacaggcaacgacacgtatcgggttgcaggcgttattg
aaacagtgcggcattcaaacgaaggaattaaatgaagagacaatcgggtttgtcattgct
ccgcgcattaatgcggtcggacggttagggggagccgatcccgctgtacggctgttgatg
acagaagatcaggacgaagcacgaatgctagcgaaggaaatggacgagctgaatcgagag
aggcagcgacttgtggcggaaatggcagaagaagcagcacaaatggtcaacgaacaattt
ccaccttcggaacataaagtgcttgtagtggcgaaggaaggttggaatccaggagttgtc
ggtatcgtcgcttcgcggcttgttgagcagttttatcgtccaaccatcgtccttagtctt
gatcctgaaaaaggaattgcgaagggctctgcgcgaagcattcatggatttgatatattc
actcagctatcggcatgtcgtgatattttaccgcacttcggcgggcatccgatggcggcc
ggaatgacgttatcgattgagcatgtggatgagctgcgtcagcgcctcaatacattagcg
aacgacatattgacagacgatgattttattccaatgacgaccattgatgttaaatgttcg
gtatccgatttgacgctcacagcggctgagcagttgcaaaagctcgcgccatttggagtc
gacaatccgaagccgctcattttaattgaagatgtctccatccaaacgattcgccgcatc
ggtgccgatcagtcgcacgtaaaagccgtatttgaacaggatggcgcaacgattgaaagc
gtgggttttggctacggctatttgtatgacgaaattgctcctgatgcgaaagtatccgtc
gttggagaactatccattaatgaatggaaccatattcgtaaaccgcaactgatgctatgt
gatgttgctgtacatgaatgtcaactgtttgacattcgcggcatgcgtcatgtacatccg
ctgttttcctctcttccgcgggaaaagaggctgtttattgcttttcatgaggagacaata
gaagctttacagttacacgattatcgtgaagaaatatgctatctttcttcgctgaaagaa
gcagagcagcttcacattgctgatcgctatgtcgtactgctagacttaccgccatcgcta
gaaatgatgaaagttttattatgttctagtttacctgcgcgcatttatgcgttattctat
caaagggagactcatttttttagcacgttgcccacgcgcgaccattttaaatggttttat
gcgtttttacggaagcgcgggatttttgatttagccaaatatggcgatgaattggcgcgg
gcacgcggctggacaaaggaaacggttcattttatggtaaaagtgtttttggaactagaa
tttattacactaaaagatggaatggtttctcttgttcatgagccggctaaacgcgattta
actgagtcacctacatatcgtttgaaacaagctcaattcgagctggaaaaactcttttta
tactcatcgtatcaacaattaaagcgtttccttttcgagatgaaaggttcgcgaacatat
gaggaggcaaacgtgtaa
DBGET
integrated database retrieval system
