Thermaerobacillus caldiproteolyticus: ISX45_12015
Help
Entry
ISX45_12015 CDS
T06899
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acai
Thermaerobacillus caldiproteolyticus
Pathway
acai03030
DNA replication
acai03430
Mismatch repair
acai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ISX45_12015
03430 Mismatch repair
ISX45_12015
03440 Homologous recombination
ISX45_12015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acai03032
]
ISX45_12015
03400 DNA repair and recombination proteins [BR:
acai03400
]
ISX45_12015
Enzymes [BR:
acai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ISX45_12015
DNA replication proteins [BR:
acai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ISX45_12015
DNA repair and recombination proteins [BR:
acai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ISX45_12015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
DUF655
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QPA30352
LinkDB
All DBs
Position
complement(2401208..2404540)
Genome browser
AA seq
1110 aa
AA seq
DB search
MSFVHLHVRSGYSLLNSTAKIPDLVKRASELGFQALALTDEDVLYGAIPFYQECKKYGIN
PIIGMIARIQMEEETYPLVLLAKNEIGYRHLLKISSTIQTKTVNGIPEKWLERYHDGIIA
LTPGKDGYIERLLRRHQKKKALEIVMRYKRIFGDDAFYIAIQRHGLQEDGEWQGELIRLS
EETNTPLVATNDVHYIEKEDAFVHDCLLAMKQGVKLQDEGRRRLPNSEYYLKSTNEMIEL
FSDIPEAIENTVKIARQCHVDIELGNRMLPKYPVPTNQSADGYLRDLCFQGLHERVLSPS
SEYIARLNYELEIIQQMKFSDYFLIVWDFMKFARKRGILTGPGRGSAAGSLVAYVLYITN
VDPLEHGLLFERFLNPERVSMPDIDIDFPDERRDEVIQYVANKYGKQHVAQIITFGTFGA
RAALRDVGRVMGATTAEIDQLVRQIPAKLGVTLQEAYEQSLSFRQAVSSSPTMQEWFETA
LKLEGLPRHTSIHAAGVVISEQPLSDIVPLQQGHDDIYVTQYPMDVLEQLGLLKMDFLGL
RTLTFIGNICALIHRHTGSTVDLQTIPFDDAKTYALLSEGDTSGIFQLESEGMKTVLKQL
KPSQFEDIVAVNALYRPGPIDYIPVYIRRKHGHETVTYLHSDLEPILQSTYGVLIYQEQI
MQIAAKIAGFSLGQADLLRRAVGKKKKDILDQEREHFVKGCIENGYGEAVADKVYDLIVR
FANYGFNRSHAVAYSMIAYQLAYLKAHYPLYFYAALLTSVIGDEEKIAAYICEMRQKGIS
LFPPSVNQSNYSFSIEKGGIRYSLASIKHIGTAAVKAIVQERKKRPFTDFFDFCTRLWGK
AINRKTIESFILAGCFDEFGVERASLLASIDIALEHAELMGPYTDADSDLFANEWSFKPK
YVETSPLSVDEKLSHEKELLGVYVSPHPVTLYRQRIQAVGTRPIAHVGKGRVEQAVRVGA
YLLRERKTRTKKGEEMAFLTISDESGEMEAVAFPDVYRRYFSFLQKNSVVVLEGKVDVRR
TKVQLVIKKVIPIDKLHALYVKICPDHMATGKLSKLKNILQKHRGEVPVFLYYEKERKTV
KLSEEYGVDATAECVTELKELLGNEYVVLK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtttgttcaccttcatgttcggagcggttatagtttgctaaatagtacggctaaa
attcccgatttagtgaaaagagcgagcgaattaggatttcaggcactcgccttaaccgat
gaagatgtgttatatggagccattcccttttatcaagaatgtaaaaaatacggaataaat
ccgattattggtatgatcgcgcgtatacagatggaagaagagacatatccgcttgtgcta
ttagcgaaaaacgaaattggctatcgtcatttactcaaaatcagtagtacgattcaaaca
aaaacagtgaacggaatccccgaaaaatggctggagcgttatcatgatgggataatcgcg
ctcactcccggaaaagacggttatattgaaagattgctgcgtcgccatcagaagaagaag
gcgcttgagatcgtgatgcgatataagcgtatatttggtgatgatgctttttacatagcg
attcagcgccacggattacaagaggatggtgaatggcaaggcgaactcatccgtctgagt
gaagaaacgaatacgccgcttgtcgccacgaacgatgttcattatatcgaaaaagaagat
gccttcgttcatgattgcttacttgcgatgaaacaaggggtaaaacttcaagacgaagga
aggagacgattaccgaatagcgaatactatttaaaatcaactaatgaaatgatcgagctg
ttttctgatataccagaggcgattgaaaatactgtaaaaatcgcacgacaatgccatgtc
gatattgaactgggaaatcgcatgctgccaaaatatccggtaccgacaaatcaatcagct
gatggctatttgcgcgatctttgttttcaaggactgcatgaacgtgttttgtccccttct
tcggagtatatagcgcgcttgaactatgagttggagattattcagcaaatgaagtttagc
gactattttttaatcgtttgggattttatgaagtttgcaaggaagcgaggaattttgacg
ggacctgggcgcggatcggcggcaggctctctagtggcatacgttctttatattacaaac
gtggaccctctcgaacacggcttattgtttgaacgatttttaaatccggagcgcgtgtca
atgcccgatattgatattgattttccggatgaacgccgcgatgaagtcattcaatatgtg
gccaataagtatggaaaacaacatgtcgcgcaaattattacgtttggtacattcggagca
agagcggcacttcgcgatgtcggaagggtcatgggggcaacgacagcagaaatcgatcag
ctggtaaggcaaattcccgctaaattaggcgtgacccttcaagaagcatacgagcaatcg
ctgtcttttcggcaagcggtgagttcgtcaccaacaatgcaagaatggtttgaaaccgct
ttgaaattagaaggtctaccgcgccatacatcgatccatgcggcaggagttgtcatcagt
gaacagccgctttccgacatcgtgccgctgcagcaagggcatgacgacatctatgtcacg
caatatccgatggatgtgttagaacaactaggattattaaaaatggattttctcggattg
cgtacactaacatttatcgggaatatatgtgctctcattcatcgccatacaggaagcacg
gtcgacttacaaaccattccgtttgatgatgctaaaacgtacgcgctattaagtgaagga
gatacaagcgggatttttcagctcgaatcagaggggatgaaaaccgttttaaaacagcta
aagccgtctcaatttgaagacattgtcgctgtcaatgctttataccgtccgggaccaatt
gattatattcccgtatatattaggcggaaacatgggcatgaaaccgttacctaccttcac
tctgacttggaaccgatattacagtccacatacggtgtattaatttatcaggaacaaatt
atgcaaattgctgcaaaaatcgcgggtttctcgctcggacaagcggatttgcttcgccga
gccgtgggcaagaagaaaaaagacattcttgaccaagaaagagagcactttgtgaaagga
tgtatcgaaaacggatatggcgaagcggtagccgataaagtatacgacttaattgtacga
tttgccaactacggttttaaccgaagccatgccgttgcttatagcatgattgcctatcag
ctcgcttatttaaaagcacattatccgttatacttttatgcagcgttattgacaagcgtc
attggtgatgaggaaaaaatcgctgcttatatttgcgaaatgagacaaaaagggatatca
ttgtttccaccttctgtaaatcaaagtaattactccttttccatagaaaaagggggaatt
cgctatagccttgcttccattaaacatatcggcacggcagcggtaaaagcaattgtgcaa
gaacggaaaaaacggccgtttaccgatttctttgatttttgtacccgtctatggggaaaa
gcgatcaatcggaaaacgatagaatcttttattttagccggatgtttcgatgaatttggc
gttgagcgtgcttctttactagcgagtatagatattgcgcttgaacatgcagaattaatg
ggaccgtatacggatgcagatagcgatttatttgcgaacgaatggtcgtttaaaccaaaa
tatgtggaaacgtcccctctttctgttgatgaaaagctatcacatgaaaaggagttgctc
ggtgtttatgtctcccctcacccggtaacgttatatagacagcgcattcaagcagtcggg
acgcggccgatcgctcatgtaggaaaaggaagagttgagcaggctgttcgcgtcggtgct
tatcttttacgcgagcggaaaacacggacgaaaaagggagaagaaatggcatttttgacc
attagcgatgaaagtggtgagatggaagctgtcgcctttcctgatgtgtatcgtcgctat
ttttcttttctacaaaaaaacagcgtagtagtgttagaaggaaaagtagatgttcgcaga
accaaagtgcaattggttattaaaaaggttatcccaatcgacaagctacacgcactttat
gtgaaaatttgtccagatcatatggcaacagggaagttatcgaaactaaaaaacatttta
caaaaacatcgaggagaggtccctgtattcctttattacgaaaaagaacggaaaaccgta
aaactttcagaggaatacggagtcgatgctactgctgaatgtgtaaccgagctgaaagaa
ctactaggcaacgaatatgttgtactaaaataa
DBGET
integrated database retrieval system
