Thermaerobacillus caldiproteolyticus: ISX45_15645
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Entry
ISX45_15645 CDS
T06899
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
acai
Thermaerobacillus caldiproteolyticus
Brite
KEGG Orthology (KO) [BR:
acai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acai03032
]
ISX45_15645 (gyrB)
03400 DNA repair and recombination proteins [BR:
acai03400
]
ISX45_15645 (gyrB)
Enzymes [BR:
acai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ISX45_15645 (gyrB)
DNA replication proteins [BR:
acai03032
]
Prokaryotic type
DNA Topoisomerases
ISX45_15645 (gyrB)
DNA repair and recombination proteins [BR:
acai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ISX45_15645 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QPA33315
LinkDB
All DBs
Position
3134627..3136549
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AA seq
640 aa
AA seq
DB search
MTMEQKVEHTYDASQIQVLEGLEAVRKRPGMYIGSTGSKGLHHLVWEIVDNSIDEALAGY
CTEIHVTIEKDNSITVVDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGGL
HGVGASVVNALSQELEVFVYREGKIHYQKYKRGVPCADLQVIGETDRTGTTVHFKPDPEI
FTETTEYDYETLANRLRELAFLNRGIKITLEDKRVENRKNEYHYEGGIKSYVQHLNRTRE
VLHEEPIYISGERDGIYVEIALQYNDSYSSNIYSFANNIHTYEGGTHESGFKTALTRIIN
DYARKYHIFKENDANLTGEDVREGLTAIISVKHPSPQFEGQTKTKLGNSDARAVTDSIFS
EQFETFLLENPTVAKKIVEKGMMAARARLAAKKARELTRRKSALEISNLPGKLADCSSKD
PSISELYVVEGDSAGGSAKQGRDRHFQAILPLRGKIINVEKARLDKILSNNEVRAIITAL
GTGIGEDFDITKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMREIIERGYVYIAQPPLY
KIQQGKRVEYAYNDRQLEKILDELPENPKPTIQRYKGLGEMNPEQLWETTMNPETRTLLQ
VSLQDAIEADETFEILMGDKVEPRRQFIEENARYVKNLDI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggagcaaaaagtcgaacatacgtatgatgcaagccaaattcaagtgctagaa
gggctcgaagctgttcgtaaacggccgggaatgtatatcgggtcaactggctcaaaaggc
ttacatcatttagtatgggagattgttgataatagtattgacgaagcattagctggatat
tgtacagaaatccatgtaactattgagaaagataacagcattacggtcgttgataacggt
cgcggtattccggttgggattcaagaaaagatggggcggccagccgtcgaagtcatcatg
accgtccttcatgcaggtggaaaatttggtggcggcggttataaagtatcgggagggctt
cacggtgtcggtgcctctgtcgtgaatgcattgtcgcaagaattagaagtatttgtttat
cgggaagggaaaatccattatcagaaatataaaagaggtgttccttgcgccgatttacaa
gtcattggcgaaacggatcgaacaggtactaccgtccatttcaaacctgatccagaaatt
tttaccgaaacaacagagtatgactatgagacactagccaatcgtttacgcgaacttgcg
tttttaaaccgcggtattaaaatcacgttggaggataagcgagttgaaaaccgcaaaaac
gaatatcattacgaaggcggaattaaatcgtatgttcaacatttaaatcggacgcgagaa
gtgcttcatgaagagccgatttatatttctggtgagcgggatggcatttatgtcgaaatc
gcccttcaatataatgacagttacagcagcaatatctactctttcgcgaataatattcat
acgtatgagggcggaacacacgaatccggttttaaaacggcattaacgcgcattatcaac
gattatgcgcgcaaatatcatatttttaaagaaaatgatgcgaatttaactggtgaagat
gttcgtgaagggttaacagccattatttctgtcaaacacccatctcctcaattcgaagga
caaacaaaaacaaagctcggaaatagtgatgcaagagcggtaacggattcgattttctcg
gaacagtttgaaacgtttttactcgaaaatccaaccgttgcaaaaaaaatcgtggaaaaa
ggcatgatggctgcccgtgcccgtctagctgcgaaaaaagcacgggaactcacaagaaga
aagagcgctcttgaaatttctaatttaccgggaaaattagcggattgctcttcaaaagat
ccttctatcagtgaattgtatgttgtcgaaggagattcggcaggcgggtctgcaaaacaa
ggaagagaccgtcatttccaagcaattttaccgttgcgcgggaaaattattaacgtagaa
aaagcacggttagataaaattttatcaaacaacgaagttcgtgctattattactgcttta
ggtacaggaatcggagaagattttgatatcacaaaagcgcgctatcacaaaatcattatc
atgaccgatgctgatgttgacggggcacatattcggacattgttattgacatttttttac
cgttatatgcgtgaaatcattgagcgcgggtacgtatatatcgcccagcctcctctttac
aaaatccaacaaggaaaacgagtcgaatatgcctataatgaccgtcaattagaaaaaatt
cttgatgaattgccggaaaatccgaaaccaacgattcagcgttacaaaggtctcggggaa
atgaacccagaacaattatgggaaaccacgatgaacccggaaacacggacattgcttcaa
gtaagtttacaagatgcgattgaagcagatgaaacgtttgaaattttaatgggagataaa
gtcgagccgcgaagacagtttattgaagaaaacgcaagatatgtgaagaatttggatatt
taa
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