Thermaerobacillus caldiproteolyticus: ISX45_17060
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Entry
ISX45_17060 CDS
T06899
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acai
Thermaerobacillus caldiproteolyticus
Pathway
acai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ISX45_17060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acai03019
]
ISX45_17060
03009 Ribosome biogenesis [BR:
acai03009
]
ISX45_17060
Enzymes [BR:
acai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ISX45_17060
Messenger RNA biogenesis [BR:
acai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ISX45_17060
Ribosome biogenesis [BR:
acai03009
]
Prokaryotic type
rRNA helicases
ISX45_17060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QPA31177
LinkDB
All DBs
Position
3393676..3395076
Genome browser
AA seq
466 aa
AA seq
DB search
MTTFHELGLSNELMKAISRMGFEETTPIQAETIPLSMQNKDVIGQAQTGTGKTAAFGIPL
VEKIDTKNDAIQGLVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKR
PHVIVGTPGRIIDHINRKTLRLERVHTVVLDEADEMLNMGFVDDIEAILSHVPTERQTLL
FSATMPEPIRRIAERFMKEPHLVKVKAKEMTVPNIVQYYLEVQEKKKFDILTRLLDIQAP
ELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHNIERTTK
RKMERMKPPTLDEALEGQQRIAIEKLVSVVESENLSFYKRAAEELLEEHDSVSLVAACIK
MLTKEPDTTPVTLTEEPPLPVKKEKKRMNRKGGQAKERTRKRRVAR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttcatgaattaggattaagcaatgaattaatgaaagctattagtcgaatg
ggctttgaagagacgacaccgattcaagcggaaacgattccgttaagcatgcaaaataaa
gatgtcattggtcaagcgcaaacaggtacgggaaaaacagctgcgttcggcatcccgctt
gtcgaaaagattgatacgaaaaatgacgcgattcaagggctggttgtggctccaactcgt
gaattagcgattcaggtatccgaagagttatataaaattggtgctgtcaagcgcgttcgt
gtgctgccgatttatggcgggcaagatattgaacggcaaattcgcgctttaaaaaagcgt
cctcatgtcattgtaggaacaccggggcgaatcatcgatcatattaatcgaaaaacgctt
cgtttagagcgcgttcatactgttgtgttagatgaagcggatgaaatgctgaacatgggc
tttgtcgacgatatcgaagcaattttaagccatgtaccaacggaaagacaaacgttgctt
ttttcagcaacaatgccagaaccgattcgccgtattgcagagaggtttatgaaagaacct
catcttgttaaagttaaagcaaaggaaatgactgttccgaatatcgtgcaatattactta
gaagttcaagaaaagaaaaaattcgatattttaacgcgcttactagacattcaagcgccg
gagcttgcaattgtatttggacgcacaaaacggcgcgttgatgagctagcggaggcgtta
aatttacgcggttatgctgctgaagggattcacggtgatttgagccaagcgaagcgttta
tccgtgcttcgtaaatttaaagaaggtgccatcgaaattttagtggcaaccgatgtggct
gcgcgcggattagatatttctggagtgacacatgtttataactttgacattccacaagac
ccagaaagctatgtgcaccgcattggtcgtacaggtcgcgctggaaaaacaggggtggcg
atgacgtttgtgacgccgcgtgaaatcggtcagcttcataatattgaacgaacgacgaag
cgaaaaatggagcgtatgaagccgccaacgctcgatgaggcgctagaaggccaacagcgc
atagcgattgagaagctggtgtcggttgttgaaagcgaaaacttatctttttataaacgt
gctgctgaagagttattggaagaacatgattccgtctctcttgtggctgcgtgtattaaa
atgttgacaaaagagccggatacgactccagtgacattgacggaagagccaccgctgccg
gtaaaaaaagagaaaaaacgcatgaatcgcaaaggtggtcaagcaaaagaacgaacaaga
aaacgtcgcgtcgctcgctaa
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