Aristolochia californica: 137933899
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Entry
137933899 CDS
T10486
Name
(GenBank) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
acak Aristolochia californica
Pathway
acak04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
137933899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acak04131
]
137933899
Membrane trafficking [BR:
acak04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
137933899
Hops complex
137933899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
zf-C3H2C3
TPR_Vps41
zf-C3HC4_2
zf_RING_Vps8_fungal
zf-RING_5
zf-RING_6
TPR_16
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
137933899
NCBI-ProteinID:
XP_068634099
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MYQWRKFEFFEEKSSGKCSMPKEIEGNIECCSSGRGKIVVGCDDGTVNLLDRGLKFMYGF
QAHTSAVLFVQQLKLRNFLVTVGVDEQTSPQLSPISLKVFDLDKMQSESSSTNIPVCIQI
LRIFTSQFPVAKITSFLVLEEAPPILLISVGLDNGCIYCIKGDVARERITRFTLQVENTS
EKSSSSVTGLGYRVDGQSLQLFAVTPSSVSLFSLQDQPPRRQTLDHIGCDVNSVAMSDRS
ELIIGRPEAVYFYEVDGRGPCWAFEGEKKFLGWFRGYLLCVIADPRSNKNTFNVYDLKNR
LIAQSMIVKEVSHMICEWGNVVLILNDKTALVIGEKDMESKLDMLFKKNLYTVAINLVQS
AQADAKATAEVLRKYGDHLYGKQDYDEAMAQYIHTIGHLEPSYVIQKFLDAQRIYNLTNY
LEKLHEKGLASKDHTTLLLNCYTKLKDVEKLDLFIKSEDGLGEHKFDVETAIRVCRAAGY
HEHAMYVAKKAHKHEWYLKILLEDLDRFKEALDYISSLEPYQAGITVKEYGKILVEHKPV
ETTDILMRLCTLDEESSTKKASSGTHLSILPSPVDFLNIFIHHPQALMDFFEKYIGKVED
SPVQVEIHNTLLELYLSNDLNFPSLSQENGFVAPYLEGTSSLGASTSTTAESKDVNKEEH
KQRLEKGLALLKRAWPADMEQPLYDVDLAVILCEMNSFNEGLLFLYEKMKLYKEVIGCYM
QAHDHEGLIACCKRLGDVSKGGDSSLWADLLKYFGELGEDCSKEVKEVLSYIERDDILPP
IIVLQTLAKNPCLTLSVVKDYIARKLEQESKLIDEDRKAIEKYQEETSAMRNEVQDLRNN
ARIFQLSKCSACTFTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYRSVLETKRNLEL
NARDHDRFFHQVKNSKDGFSVVAEYFGKGIISKTIEVPQDNTT
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagtggcggaaattcgagtttttcgaggagaaatcctcgggaaaatgttcgatg
ccgaaggaaattgagggaaacatagaatgttgttcgagcggacgagggaagattgttgtg
ggttgtgacgatggtaccgtgaatttgcttgatcgagggctgaagttcatgtatggtttc
caggcccacacatctgctgtcttgtttgttcaacagttaaagctacgtaattttcttgta
actgttggagtggatgagcaaacatctccacagctatcaccaatcagcctgaaggttttt
gacctggacaagatgcaatcagaaagctcaagcactaatattccagtttgtatccaaatt
ttacgtatatttaccagtcaatttccagttgcaaagataacatcattcttagttcttgag
gaagctccgcctatattactcatatcagttggactggacaatggttgtatttactgcatc
aaaggggatgttgcgagggagcgtatcactcgtttcacactccaggtggagaatacatct
gaaaagagtagctcttcagtcacaggattaggttacagagtcgatggccaatccctgcaa
ctcttcgctgttactccttcttcggtgagcttgttcagtttgcaggatcaaccacctagg
cgccagacattagatcatattggatgtgatgtcaatagtgtagcaatgagtgatcgctcg
gaactaataattggtcgtcccgaggcagtttacttctatgaagttgatggtcgtgggccc
tgttgggcttttgaaggggagaagaaatttctggggtggtttcggggatacctactatgt
gtcattgcagatccaagaagcaataagaataccttcaatgtttatgatcttaagaaccgg
ttgattgcccaaagcatgatagttaaggaggtatcacatatgatttgtgaatggggtaac
gtagttctgatacttaatgacaaaacagctttagtcattggagagaaggacatggagagc
aaattagatatgctcttcaagaaaaatttgtatacggttgccatcaatcttgttcagagt
gcccaggcagatgcaaaggccacagctgaagtcctaaggaagtatggggaccatttatat
gggaaacaagactatgatgaagccatggcccaatatatccacactattggtcatcttgaa
ccttcttatgtgatacaaaagtttcttgatgcccaacgtatctataatcttacaaactat
ttggagaaattgcatgagaaaggactggcttcaaaagatcatacaaccctattgctaaac
tgctatacaaaattgaaagacgtagaaaagctggatttgttcattaagagtgaagatggg
cttggagagcacaaatttgatgtggagactgccattagagtctgccgtgctgctggctat
catgagcatgctatgtatgttgctaagaaagcgcacaaacatgagtggtacttgaagatc
ttacttgaagaccttgataggtttaaggaagcactggattatatatcaagtcttgaacct
tatcaagctgggataactgtgaaggagtatggtaagattcttgtggagcataagccggta
gagactactgatattctaatgagattgtgcactcttgatgaagaatcaagcacaaagaag
gcctcaagtggaacccacttatctatactgccatctcctgtagattttctcaatatcttc
atccaccatcctcaggctcttatggatttttttgagaagtatattggcaaagtggaagac
tcccctgtgcaagtagaaattcacaataccctcctggagctatacctatctaatgacttg
aactttccgtcactctcacaggaaaatggctttgttgctccctatctggaaggaactagt
tccttaggtgcttcaacatccacaacggctgaaagcaaagatgtgaataaagaggagcac
aagcaacggcttgagaaaggactggcattgctcaagagggcatggcctgctgacatggaa
cagcctttatatgatgtggatcttgctgtcattctttgtgagatgaactcattcaatgaa
gggcttctgttcttatacgagaaaatgaagctttataaagaagtgattggttgctatatg
caggcccatgatcatgaggggttgattgcttgctgcaagaggctaggagatgtgagcaaa
ggtggggattcatctctttgggctgatctgctcaagtactttggggaacttggagaggat
tgctccaaggaagtcaaagaggtgttgtcatatattgaaagagatgacatattaccccca
attatagttctacagactcttgctaagaacccatgtcttactctctctgttgtgaaagat
tatattgctcggaaacttgaacaagaatcaaagctgattgatgaggataggaaagctatt
gagaagtatcaggaagaaacctcagctatgaggaatgaggtccaggatttgaggaacaac
gcaaggatcttccagctgagcaaatgctctgcttgcactttcacacttgatcttcctgca
gtccattttatgtgcatgcattcgtttcatcaacggtgcctgggtgacaatgagaaagag
tgccctgaatgtgcacctgagtacaggtcagtcctagagacgaagagaaacttagaactg
aatgccagagatcatgatcgattcttccatcaagtcaagaactccaaagatgggttctct
gtagttgctgaatattttggtaagggtattatcagtaaaaccattgaagtcccacaagat
aatactacctga
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