Aristolochia californica: 137933910
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Entry
137933910 CDS
T10486
Name
(GenBank) serine/arginine-rich splicing factor SR34A isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
acak Aristolochia californica
Pathway
acak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137933910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acak03041
]
137933910
Spliceosome [BR:
acak03041
]
Common components
Common spliceosomal components
SR proteins
137933910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_YTH1
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
137933910
NCBI-ProteinID:
XP_068634116
LinkDB
All DBs
Position
Unknown
AA seq
296 aa
AA seq
DB search
MWSLLEDMGKWSSWSTTWSKGCPPVEFAILSASLIVEMSGRASRTIYVGNLPSDIREWEI
QDLFHKYGHVVDVELKIPPRPPGYCFVEFDDARDAEDAIRGRDGYNFDGHRLRVELAHGG
RGHSSSSDRRSGHGGGGGGGSGGRYGASRRSEFRVVVRGLPSSASWQDLKDHMRKAGDVC
FAQVFRDGDGTMGVVDYTNYEDMKYAIRKLDDSEFRNPFSRAYIRVKADEGSPSRSRSRS
RSRSPKRARSKSRSVSPKSRSVSKSVSPRSRSVTPARMSRSRSRSESPDQARSGSR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtggagtctcttggaggatatgggcaaatggagctcgtggagcacaacttggagcaag
ggttgccctcctgtggaatttgctatcttatccgcatctttgatagtggaaatgagtggt
cgagcttctcgcacaatatatgttgggaacctaccatcggatatccgagaatgggaaatt
caagacttgtttcacaagtatggccatgttgtggacgtcgaattgaagatcccgcctcgc
cctccaggctactgttttgtggagtttgatgatgcacgagatgctgaagatgctataagg
ggacgcgatggctacaacttcgatggacatcgtttgagggttgagcttgcccatggaggt
agaggccattcatcgtcatctgatcgtcgatctggacatggaggtggaggtggaggtgga
agtggggggcgatatggagcctcacggcggtcagagtttcgagtggttgtccgtgggctt
ccttcatctgcctcttggcaagatttgaaggatcacatgaggaaggctggagatgtctgt
tttgctcaagtattccgggatggtgatggaaccatgggtgttgtggactatacaaattat
gaagatatgaaatatgctattcgcaaacttgatgactcagaatttagaaatcctttttcc
agagcttatattcgggttaaggctgatgaagggagcccatcaaggagccgaagtaggagt
cggagtcgaagtccaaaacgtgcccggagcaagtcacgatctgtatcgccaaagtctaga
tctgtttcaaaatctgtttcgccaaggtcaagatctgttacacctgccagaatgtccaga
tcaagatcaaggtcagagtctcccgaccaggcacgatcaggcagtcgctga
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