Aristolochia californica: 137933971
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Entry
137933971 CDS
T10486
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
acak Aristolochia californica
Pathway
acak03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137933971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acak03000
]
137933971
03021 Transcription machinery [BR:
acak03021
]
137933971
Transcription factors [BR:
acak03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
137933971
Transcription machinery [BR:
acak03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
137933971
RNA polymerase III system
TFIIIB
137933971
RNA polymerase I system
SL1/TIF-1B
137933971
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
137933971
NCBI-ProteinID:
XP_068634229
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MADQVLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALHARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAHSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
TYTAFENIYPVLTEFRKNQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcaggtcttggaagggagtcaaccagtggacctttccaaacatccctctggc
attgttcctacgcttcagaacatagtctctacagttaatctggactgcaaattggacctg
aaagctatagctctacacgctcgaaatgcagaatataatcccaagcgttttgctgccgta
attatgaggattagagaacccaaaacaacagcactaatatttgcatctgggaaaatggtg
tgcactggggctaagagcgagcaacaatccaaattggctgctaggaagtatgctcgtatt
atacagaaacttggttttcctgccaaattcaaggatttcaaaattcagaacatcgttggc
tcttgtgatgtcaaatttcccataagacttgaaggccttgcacattcccacggtgctttc
tctagttacgagccagaactgttcccgggtcttatataccggatgaagcagccgaagatt
gtgctgctcatatttgtgtctgggaagatagtcttgactggtgcaaaggtaagggatgag
acatatacagcttttgagaacatttatcccgtcctgactgagtttcgaaagaatcaacaa
tga
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