Aristolochia californica: 137934009
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Entry
137934009 CDS
T10486
Name
(GenBank) E3 ubiquitin protein ligase RIN2-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
acak Aristolochia californica
Pathway
acak04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137934009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acak04121
]
137934009
Enzymes [BR:
acak01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
137934009
Ubiquitin system [BR:
acak04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137934009
Multi subunit type E3
ERAD complex
137934009
LMBR1L-GP78-UBAC2 complex
137934009
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUE
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_11
zf-C3HC4_3
zf-C3HC4_2
zf-RING_16
zf-RING_5
zf-C3HC4_4
E3_UbLigase_EDD
RINGv
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
137934009
NCBI-ProteinID:
XP_068634283
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MGVSYLAASAVCTVLSLAGLQWWTNSELAKFQSDGSLGDNGLHSGNTTRALELLLGSYVT
IGLLANFSINLFILVILCIKTIFFVKLYPSETRKVVERLVNYVVYKGTLLPLVVPPIIFQ
AALWSTWLTVLCSLKMFQGLARERLERLNASPSATSWAYFRVFSVLLLVLSVDLLWIRLC
LLIYTSLGSSMFLLLFFEPLCIGFETLQAIMVHGFQLLDMCHRQSMDSDADCHHPFDRSA
AGTLYEWKGILIRNLGFLLDLMTLLTGLGHYLHIWWLHGMAFHLVDVVLFLNIRALVSTI
IERVKGFIKLKQALSSLNRVLPDATADELYAYNDDCSICREPMARAKRLACNHLFHLACL
RSWLDQGLSEVHACPTCRRPLFAVPTGNYANSRAAEVLHDEQLARQLSSGLDHSAQPGHL
SPPMVAFPNQQQNTADSNMWRGMGLNPGWMQPWPGQGFDGTGPSTTAISSVGFGSVQMMM
RHLASVGDSYGHSAIEDSSWSLWPMAHPSAASGSSPPPVRPPVRYDGNTNGLRFRNTNDN
ISSLLAMADTVREVLPHIPDELILQDLQRTHNVAVTVNNLLQI
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgagttacttagctgcctcggcggtatgtactgtgttgagccttgcgggcctc
caatggtggacaaattcagaactggccaagttccaatcagatggatctttaggtgataac
ggacttcattccgggaatacaactcgtgcccttgagctgcttttgggttcatatgtcaca
attggattgttggcgaacttctcaataaacttgttcattctggttattctatgtattaag
acaattttctttgtgaaactctatccttctgaaactcgaaaagttgtggaacgccttgtt
aactatgttgtttacaagggaactttgcttcctttggtggttccacctatcatttttcaa
gcagccttgtggtccacctggttgacagttttgtgttccctgaagatgtttcaaggattg
gctagagagagacttgaacggttgaatgcttcaccatctgctacttcttgggcatacttt
cgggtgttttcagtcttactgttggttctttcggttgatttactttggataaggctgtgc
cttttaatatacacttctctgggttctagcatgtttttgcttttgttctttgagcctctg
tgcattggttttgaaacactccaggctattatggttcatggctttcagttgcttgacatg
tgccaccgtcagtcaatggatagtgatgctgactgccaccatccatttgatagatcagct
gcaggtacattatatgagtggaagggcattcttatccgaaacttgggctttcttctagac
ttgatgaccttgttaactggacttggtcattacttgcatatctggtggcttcatggcatg
gccttccatcttgtggatgtagtcctcttcctgaacatacgtgcattggtaagcactata
atagagcgggtcaaaggattcatcaaattgaagcaagccttaagtagcctcaatagggta
cttcctgatgctacagcagacgaattgtatgcttacaatgatgattgttctatttgcagg
gaaccaatggccagagctaaaagacttgcttgcaaccaccttttccatcttgcctgcttg
aggtcttggttggatcaaggtctaagtgaagtgcatgcatgcccaacttgtcgaaggcct
ctctttgcagttccgactggaaattatgcaaacagtcgggctgcagaagttttgcatgat
gagcagcttgctcggcaattaagttctggattggaccatagtgcccaacctggacaccta
tcaccacctatggtggcatttcctaaccagcagcagaacactgctgactctaacatgtgg
agaggcatggggttgaatccaggttggatgcaaccttggccaggacaaggatttgatggt
actggcccatctactactgcaattagctctgttggttttggcagtgtccagatgatgatg
agacatcttgcatctgtgggtgattcctatggtcatagtgccattgaagatagttcatgg
agtctttggcccatggctcacccatcagcagcttctggttcatctcctcctccagtgcgc
cctcctgtcagatacgatggaaacactaatggattacgttttaggaatactaatgacaac
atatcaagtttgcttgcaatggctgacacagtgcgggaggtgttgcctcacatcccggat
gagttaattcttcaggatttgcagcgaacccacaacgttgctgttactgtgaataatctc
cttcaaatatga
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