Aristolochia californica: 137934359
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Entry
137934359 CDS
T10486
Name
(GenBank) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
acak Aristolochia californica
Pathway
acak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137934359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acak03400
]
137934359
DNA repair and recombination proteins [BR:
acak03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
137934359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
137934359
NCBI-ProteinID:
XP_068634743
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
MESCSCVARRSRSRKTPTLPDIPPCGKDEARIHQCDCKIKEFNPDCGRTRVLESKEESSF
SRKSKGVENFVVDDSGEEEDEDDDDDDDDDDYDDEDEGEDSEEEEERFPPSRSKRRAENE
QPGVSRRPNEIKEEEYIVITDDSDDGDLVGSESSKHSCECCLLRKTSRSIQGPNPTMRGT
LPLDSSSVSYPSSADEDTQERSIDGRESSVSTSGVALEEEIEGMPFRRKKASGIDVLVSI
RETHEEATFQGLGIAGRTRSRYPSRNPSRITKTEGTFSRPLDLENSEEEPSNPAATGDAV
RSKKGEGPSNTNDAVSNREEEEYDSSGSEVYRKNEEIRRGKFKLGKSTKRKQGRASRDDA
FFKLLVNTVWGTGTTSPEELNPAQPKVRTPEIDELTLQLKFPYDEEGVPTGREKPEMENL
EDELWTELDFAMRLTEMGSFEPAVDSKETCAADKEIDQSILCQSGKHEYILNEKVGITCR
HCAFLKVNIRHVFPRMAMNHWRKSGKWKHDDIKDPMEWDDPQIPDTNDDSPGLETLPPGT
VWDIVPEARKTMHRHQREGFEFMWKNLAGSILYRELESSCSDVVGGCVISHAPGTGKTLL
TIVFLQTFLEVFPNCRPIIVAPQNMLLSWEREFKKWNVNVPFHILNQKGLSGEEDDLLLK
LFHEKRSLHRKRNDVRMVKLYSWNKGKSVVGLSYQLFQRLAESKDSSDEQSAHIAKILLE
KPGLLVLDEGHTPRNSKSLIWKALVKIKTERRIILSGTPFQNNFNELYNILCLVRPRFAN
SLSSRISGKSFLMPKRKRPRWEWDVLTSSIGKATDDNLEELRSILDPFVHVYKGSILKSL
PGLRECLVVLHPYPRQKQVLDSIQNIPARNCMGRECAVSLISVHPSLITTCSLSEDEESA
IDKHQLERLRDDPNEGVKTRFVMELIRLTGALGEKVLVFSQYLEPLEFIKKHLTSHFNWT
EGKEVLQMDGSIGMKHRQSKIDSFNEPSSEVKVLLASTKACCEGINLTGASRVVLLDVVW
NPSVERQAISRAYRLGQTKVVYTYHLIASGTNDEDKYSIQVKKERLSELVFSSKDCQMDK
EINPSKVFEDIILEEMVNHEKLKSMFAKIVYHPKETPHL
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgtgctcctgcgtagccagaagatctcgctctcggaaaacccccactttgcct
gatattcccccctgcggaaaagacgaggctcggattcaccaatgcgactgtaaaattaag
gaatttaatccggactgtggtagaactagggttcttgagtcaaaggaagaatccagtttt
agtaggaaaagcaaaggcgttgaaaatttcgtcgtggatgatagcggtgaagaagaagac
gaagacgacgacgacgatgatgatgatgatgattatgatgacgaggatgagggagaggac
agcgaggaggaggaggagcggtttcctccatcacgtagcaaacggcgggcggagaatgaa
cagccaggcgtgtctcgccgtccaaatgaaatcaaagaggaggagtatatcgtgatcacc
gatgattctgacgatggagacttggttggttcagagtccagtaaacattcttgcgaatgt
tgtctgttaaggaagacgagtcggtcgatacaggggccgaatccgaccatgaggggaact
cttccgctggactcttccagtgtctcatacccttcatccgcggatgaagatacgcaagaa
aggtctattgatgggagagaatcgtctgtaagcactagcggcgtggccttggaagaagaa
attgaaggaatgccgtttagaagaaaaaaagcttcaggaattgatgttcttgtttcgatc
cgagaaacacatgaagaagctacttttcagggtttgggtattgctgggcgtacacggtct
cgatatccttctagaaatccttctagaatcacgaagacggaaggaacttttagccggcca
cttgacttggagaattctgaagaggagccgtccaatcctgccgccactggagatgctgtt
agaagcaagaaaggagaaggtccttccaacactaatgatgctgttagcaaccgcgaagaa
gaagaatatgacagtagtggaagcgaagtttacagaaagaatgaagaaataaggagggga
aagttcaaactaggtaagtctaccaagagaaagcagggtcgtgcatctagagatgatgcc
tttttcaagcttcttgttaatacagtttggggtacagggacaacatccccagaagaacta
aatcctgcccaaccaaaagttagaactccagagatagatgaattaacgctccaacttaaa
tttccatatgatgaagagggggtgccaacaggaagagaaaaaccagagatggaaaactta
gaggatgagctatggactgaattagattttgctatgcgtttaactgagatgggttccttc
gagcctgcagttgacagcaaggaaacctgtgcagcagataaggaaatagatcaatccata
ctgtgtcaaagtgggaaacacgagtatatcctaaatgagaaagttggaatcacatgcaga
cattgtgcttttctaaaagtgaatatcagacatgtttttccgcgtatggcgatgaaccat
tggcgaaaatcagggaaatggaaacatgatgacattaaggatcctatggagtgggatgat
ccccagataccagatacaaatgatgattccccaggcctagaaactcttccgccgggaaca
gtatgggatatagtgccagaggctcgcaagaccatgcatcgccaccagcgtgagggcttt
gagtttatgtggaaaaatctagctggcagcattttatatagggagttggagtcttcatgt
tctgatgttgtgggtggctgtgttatttcacatgctcctgggactggaaagacccttttg
accattgtctttctccagacgttcctcgaggtctttccaaactgccgaccaatcattgtt
gcaccccagaacatgctcctctcatgggagagagagttcaagaagtggaatgtaaatgtg
ccatttcacattcttaatcagaaaggtttatctggtgaagaagatgacctgcttctcaaa
ctttttcacgagaaaagatctttgcacaggaagaggaatgatgtgcgcatggttaagtta
tattcatggaataaaggaaagagtgtagtaggattgagctatcagctgtttcagaggctt
gcagaaagtaaggattcaagcgatgaacaatctgcacacattgctaaaatcctcctggag
aagcctggcttgttagttcttgatgaagggcacacaccgcgaaacagcaaaagtctcatt
tggaaagctctggtcaaaatcaaaacagagcgtaggatcattctttctgggacccccttt
cagaacaatttcaatgagctttacaacatactatgtttagttagaccaagatttgccaac
agtctctcgtctaggatctctggaaaaagcttcttgatgccaaaaaggaaaaggccgaga
tgggaatgggatgtattgactagttctatcggcaaagctactgatgacaatttagaagag
ctccggtccatattggatccttttgttcatgtttataaggggagtatcctgaaaagtctt
cctggattgagggagtgtttggttgtgttacatccatatcctcgacagaagcaggttcta
gacagtattcagaatatacctgcaaggaactgtatgggacgagaatgtgcagtttctcta
atttcagttcatccttcacttataacaacatgttctctttctgaagacgaggaatctgcc
atagacaaacatcagttagaaagattgagagatgacccaaatgaaggagtgaagacaaga
tttgttatggagctcatccgactgactggagcattgggtgagaaagtattggtattcagt
caatatcttgaaccattagagttcataaaaaaacatctcacaagtcactttaattggaca
gaagggaaagaggtgctgcaaatggatggtagtataggtatgaagcaccgtcagtctaag
attgactctttcaatgaaccatccagtgaagtaaaggttttgctagcatccacaaaagct
tgttgtgagggtatcaatttgactggagcgtccagggtggttctccttgatgttgtgtgg
aacccttcagtggagagacaagccatcagcagggcttataggttggggcagacaaaagtt
gtttacacttatcatctcattgcatcaggaacaaacgatgaggataagtacagtattcag
gttaagaaggagagattatctgaattagtattctcttctaaagactgccaaatggataag
gaaattaacccatcaaaggttttcgaagatataatcttggaagaaatggttaaccatgaa
aaactcaaaagcatgtttgcaaagattgtttatcatccaaaggagacacctcatttgtag
DBGET
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