KEGG   Aristolochia californica: 137934437
Entry
137934437         CDS       T10486                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
acak  Aristolochia californica
Pathway
acak03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:acak00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    137934437
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acak03021]
    137934437
   03036 Chromosome and associated proteins [BR:acak03036]
    137934437
Transcription machinery [BR:acak03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     137934437
   Coactivators
    SAGA/TFTC/STAGA complex
     137934437
Chromosome and associated proteins [BR:acak03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     137934437
    STAGA complex
     137934437
    TFTC complex
     137934437
    SAGA complex
     137934437
    SLIK complex
     137934437
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_IFT122_1st TFIID_NTD2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 NBCH_WD40 Beta-prop_WDR90_POC16_2nd DSE1_N Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_NOL10_N ASA1 CFAP251_N Beta-prop_WDR19_1st Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF4 PAC11 Beta-prop_SPT8 Tricorn_2nd Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 LisH_PAC1 LisH PALB2_WD40 Cytochrom_D1 U3_snoRNA_assoc
Other DBs
NCBI-GeneID: 137934437
NCBI-ProteinID: XP_068634864
LinkDB
Position
Unknown
AA seq 664 aa
MEEEEIEKAVLAYLKKKGFKQTELALQEEQSKSSLNTQTDPAVARRILSFSESENIPARY
MEGYSKLRSWTYNSLDSYKHELLRVLYPVFIHSFLDLVAKGHVQEARTFFNRFREDHEMM
HARDLLKLEGILTPSHLDEMEFAHTLRQSKVNIKICEYSKELLMQYLQKSEPITMLGVIN
EHINFQVSPGQPSSISDDADAVTLIGGSQDTAKQINQKEIRWGLLEDSLDERMEKASSLV
SDLEKTEGESKKGDSEDGKKKLGEGGKQGNTSKKLKKDKVVGATSKTVRSETHSVSMAPR
VKPELTLPAIPTEVEHAVLEDLRNRVQLSSLALPSVSFYTFINTHNGLNCTSISQDGSLV
AGGFSDSSLKVWDMSKMGQQVDASNVQTENDSNPSENLLGSENGKRSYTLFQGHAGPVYS
ATFSPLGDFILSSSSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPLGHYFASSSHDRT
ARIWSMDRIIPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDIQSGECVRIFIGH
RSMVLSLAMSPDGRYMASGDEDGTIMMWDLSSGRCVTPLMGHTSCVWTLAFSCEGSLLAS
GSADCTVKLWDVTTSVRGPKTDDSKTGGANRLRSLKTLPTKSTPVYSLQFSRRNLLFAAG
VLSK
NT seq 1995 nt   +upstreamnt  +downstreamnt
atggaggaggaagagatcgagaaagcggttttggcgtatttgaagaagaagggttttaaa
caaacagagcttgctttacaagaagaacagagtaaaagctctttaaatacgcagacggat
cccgccgtcgccaggcgaattctttctttctctgaatcagagaatatcccagcacgatac
atggaaggttacagcaagcttaggtcttggacatacaattcattggattcatacaagcat
gaattgcttcgggtgttgtatccagtctttatccattcgtttctagatcttgttgccaaa
ggacatgtgcaggaagcaagaactttcttcaatagattccgtgaagaccatgaaatgatg
catgcaagagatctgctaaagttggaaggcattcttactccctctcacctggatgagatg
gaatttgctcatactctgaggcaaagcaaagtcaacattaagatttgtgagtactcgaaa
gagcttctcatgcaatatctacagaagtcggagcctattacaatgcttggagtgattaac
gagcatattaattttcaagtttctcctggacagccgagctccatctctgatgatgcagat
gctgtaaccttaattggaggtagtcaggatactgctaagcaaataaatcagaaagaaata
cgttgggggttgcttgaggattctttagatgaacgcatggagaaggcctcaagtttggtt
tcagatcttgaaaagacagaaggtgaaagcaaaaagggagattctgaagacggtaagaag
aagttaggagagggaggaaagcaagggaataccagtaagaagttgaaaaaggacaaggtt
gttggtgctaccagcaaaaccgttcgttctgagacacactctgtctccatggctcctcga
gtgaagccagagcttaccttgccagcaattccaacggaagtagaacatgcagttcttgag
gacctaaggaatcgtgtgcagttgagtagcttggcattgccatctgtcagcttctatacg
tttattaacactcataacggactgaactgcacatcaatatcccaagatggctcactggtg
gctggtggattctcagattcatcactaaaggtctgggatatgtcaaagatggggcagcaa
gtggatgcttccaatgtgcaaacagaaaatgactccaatcctagtgaaaacttgctggga
tcagagaatgggaaaagatcttatacattatttcagggtcatgctggacctgtttattct
gctacatttagcccactgggggattttatcctatcttcttcatcagattctacaattcga
ttgtggagcacaaaactcaatgcaaatcttgtgtgttacaagggtcacaattacccagtg
tgggatgttcagtttagccctttaggacattattttgcgagctcatcacatgatcgaact
gctaggatttggtctatggacagaatcattcctttaagaataatggctgggcatttatca
gatgttgattgtgtacagtggcatgcaaattgtaactatattgcaactggttctagcgac
aagacagtcagactatgggatatccaaagtggagaatgtgtacgtattttcattggccat
agaagtatggtactgtcattagcaatgtccccagatgggcggtatatggcatctggtgac
gaagatggaacgatcatgatgtgggatctttcaagtggccggtgtgttacacctctaatg
ggccatacatcttgtgtttggacgcttgctttcagttgtgaagggtcattactggcttct
ggatctgctgattgcactgtaaaactatgggacgtcactacgagtgtaagaggtccaaaa
actgacgacagcaaaactggaggtgctaacagactgaggtcattgaaaactttgcccaca
aaatcaactccagtctattccttgcagttctcccggagaaatcttttgtttgcagcaggg
gtgctctcaaaatga

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