Aristolochia californica: 137935030
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Entry
137935030 CDS
T10486
Name
(GenBank) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
acak Aristolochia californica
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acak03021
]
137935030
Transcription machinery [BR:
acak03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
137935030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
137935030
NCBI-ProteinID:
XP_068635762
LinkDB
All DBs
Position
Unknown
AA seq
1952 aa
AA seq
DB search
MWTNVFRIGGLQQVSWFQFLPCEYDPNTLPEKSTKAEQKDAATLLVLSAHLKLQNEGFLS
TWTNSFVGPWDPSQGIHNPDEKIKLWLFLPGRYSSVVETAQAAVSRLRVVGAGLWSAPGD
SEEVAAALSQALRNCIERALRGLSYMRFGDAFTKSQSLPRSETHIRRAQPICEFIFAATE
EAIFVHAIIYAKQIRTLSSDDMERVLRHHSSYKHGEGIPVLVAPHGMRGRLSGCCPSDLV
KQVYSSKVNSRSANGFTVLGIPLHGSAQSSNYQLRGQSCYVEVTLGCPNSKLCGSKSEAN
KGMVEALPVTGRKFIYPAEAVMVPLMYTTVAKSSLKRLWLQNCAGTSPFELWPLMNFPDS
HSLVHGSKYGNSGNFESNATRRQHRYNSSSNSNSSSISSISSTSSDSDFGPTARTGDLET
DADSLASRQSGLSTNDQLENDGCNLAPKRLRIGGTESFGQAGNVLTGSVREAYKSEHSGV
EGNNSTITGGVNDQFGSHNWDWDNDDRGMDMDMRTLLSEFGDFDDFFQNDVLAFGEPPGT
AESQVLMFPVDIGDISGSPCTAGMDVSDAMLLPPIGFPTYEGFSQPPPLIGEEALNGPQE
IAADARSSCHSTATSSGEFDHLTKVEAMLTFASEYTAVQTPASEFPASIFRSPYLPKSQT
VDTAHSSSNVYVYGVTPPSSPLLEVSNEKPENISAKAKVSPIGLDSFSVLQLQKCYTHVL
SAKQQQLDRQTDYCSQNMASCKGEKLTSPASAFNSSSAVKSLQRTKAENTVETLFLVSHK
TVLATEVECIMFQAAMCRIRHIPIPSVNIGAIVMKGVNRNTIMDQSQYETSIICEVKKKE
TIPVRIAGDIDGGVPDGGTLNAPVGVWRSVGLPKGTKFASSPNFDGSLALSQNVFNDEGI
PIYGQRQPLQDLLDAMGLLVQQATSFVDVSLDTDRGDGPYGWLALQEQQRRGFACGPSMV
HAGCGGLLAACHSLDIAGVELLDPLSADVHASSVIGLLQADIKVALKSAFGNLDGPLSIT
EWCKGRNQSGDTAGISGDGYSLESTLTEAKDTSSSVTLASEPISPPQSSTSGSSFVKATD
GSRLDEGRINQELCGSELEQINNSRLRPTLMVVPLPSILVGYQDDWLKTSASSLQLWEKA
PLEPYALSKPMTYCVVCPDIGPLMSATADFFQQLGTVYESCKLGSHLPHQVSGGQTEVAS
GFCLVDCPHNLKATCSNLTLMGSVSEFVIALSKGWDVRNFLVSLSKVVKALKVGLNSAVN
QKEGGTGSCLVIYVVCPFPEPTAILQTLVESSVALGSSTLSSDKDRALLHSQVGKAFSCT
AGVDETSISSILTLSGFSVPRLVLQIVTIETIFVNELSLLKDIAFTVYNKARRVPRTSSS
DMSQSSGISGRTQSAMMNMPSSMPGLWKDCMTSRITASTPDLDAGLRPGTWDNSWQTSRT
GGLSCESNRSKDFLYQEEVRYLFEPLFILAEPGSVDHGVSIGHLVSESPCSRPAADDNIG
GYMQNSASSTTADMGPASLLEGSETDSSGSNQRSTSLHCCYGWTEDWRWLVCIWTDSRGE
LLDSNIFPFGGISSRQDTKGLQGLFVQVLQQGCQILSSSSPDGGTVRPRDIVITRIGCFY
ELECQEWQKAIYFVGGNEVKKWPIQLRRSIPDGVPSGSNGTTLQQQDMSLIQERTLPSSP
SPSLYSPHSKPSGFIKGSLGQSNSRKQHQVGGQAGVDISRGLLQWVQSISLVGLSVDHSL
HLVFPADSYHLGGGAQSGLGITLFNYLEGFSPVKSLGATPASYILIPSPSMRFLPPVPLQ
LPTCLTAESPPLAHLLHSKGSAIPLSTGFVVSKSVPSVRRDFAKDEWPSVLSVSLVDYYG
ASNLSPQEKMVRGVHTKQARVLNPDTRDYEMEIHMVLESVSAELHALSWMTVSPAYLDRR
TALPFHCDMVLRLRRLLHYADKQLCQSTENQV
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atgtggacaaatgttttcagaattggaggtctacaacaagtttcttggtttcagtttctc
ccatgtgaatatgacccaaacactctacctgagaaaagtacaaaagcggagcagaaagat
gctgcaacactgcttgtgctttcagctcacctgaaactacaaaatgaagggtttctcagc
acatggacaaattcctttgttggaccttgggatccatctcagggtattcacaacccagat
gagaaaatcaagctctggctttttctacctggacgctactcatctgttgttgaaactgct
caggctgcagtttctagattgagagttgttggagctgggctttggtcagcccccggggat
tctgaagaagttgctgctgctttatctcaagcacttcggaattgtattgaaagagcattg
agagggctttcttacatgagatttggagatgcattcacgaaaagccaatctcttcctcga
agtgaaacacatatcaggagagcccagcccatctgtgaatttatctttgctgctacagaa
gaagcgattttcgtgcatgcaataatatatgcaaagcaaattcggacactttccagtgat
gacatggaaagggtattgagacatcattcttcttataagcatggtgaaggaattccagtt
cttgttgctcctcatggaatgcgtggaagactttctggttgctgtccaagtgatcttgtt
aaacaagtgtattctagcaaggttaacagtaggtctgcaaatggcttcactgttcttggc
attcctttacatggttctgcccaatcttctaattaccaacttagggggcaaagttgttat
gttgaagttacccttggctgccctaattctaagctatgtggttcaaaaagtgaggcaaac
aaaggaatggtggaagccttaccagttactggaaggaaattcatttatccagcggaggca
gtaatggtaccacttatgtacacaacagttgctaaatcttctttaaaaaggctgtggcta
caaaactgtgctggaacttctccgtttgagttatggccactaatgaactttccagattca
cattctcttgtacatggctcaaagtatggtaactctggaaactttgaatctaatgctaca
cggaggcagcatcgctataatagcagcagcaatagtaacagtagtagcattagcagcata
agtagcacgtccagtgatagtgattttgggcccactgcccggacaggtgacttagagaca
gatgctgattctcttgcatctagacaatctggtttatctacaaatgatcagcttgaaaat
gatggttgcaacctggctcccaaacgtctccgtattggtggaactgaatcctttggccaa
gctggtaatgtcctcactggatctgtgcgagaagcatataagtctgaacatagtggtgtt
gaaggaaataattcaacaattacaggtggagttaatgatcaatttggatctcataattgg
gattgggataatgatgacagaggcatggacatggacatgcgtacacttctttctgagttt
ggagactttgatgacttctttcaaaatgatgttctggcatttggcgagcctccaggaaca
gcagagtcacaggttcttatgtttcctgttgatattggagatattagtggcagtccttgt
acagctgggatggatgtctcggatgcaatgcttttacctcctataggatttccaacttat
gaaggattttcccagccacctccacttattggtgaggaagctcttaatgggcctcaagaa
attgctgcagatgcacggtcgtcctgccattctactgcaacctcctcgggagagtttgac
catctcacaaaagtggaagcgatgttgacttttgcttctgaatatactgcagtgcagaca
ccggctagtgagtttccagcctctattttcagaagtccttacttaccaaagtctcaaaca
gttgatacggctcattcaagctcgaatgtttatgtttatggtgtcacgcccccctcttct
cctttactggaggtatctaatgagaaacctgagaacatttcagccaaagcaaaagtgtct
cctattggactggattcattctctgtgcttcagttacaaaagtgctacacacatgtgctt
agtgcaaaacaacagcagctggatagacaaacagattattgctctcagaatatggcttca
tgcaagggtgagaagttaacttctccagcttctgcttttaattcatcaagtgcagtaaag
tctctgcaaaggacaaaggctgaaaatacagtggaaaccctttttctggtgtctcacaaa
actgtccttgctactgaagttgaatgtatcatgtttcaggcagctatgtgcagaatcagg
cacataccaataccttctgtgaacataggtgccattgtgatgaagggagtaaatagaaac
actattatggatcagtcccaatatgaaacctccataatatgtgaggtgaagaaaaaagag
acaatacctgtgagaatagcaggtgatattgatgggggtgtacctgatggtgggaccctg
aatgcacctgttggtgtttggaggtccgttggtttaccaaaaggcacaaaatttgcaagc
tcccccaattttgatggttcgctggccctatcacagaatgtcttcaatgacgaaggcatt
cccatttatggacagagacaaccacttcaggaccttcttgatgccatgggtttacttgtt
cagcaagctacttcttttgtagatgtgtcacttgatactgatcgtggagatgggccctat
ggttggcttgcattacaagagcagcagaggcgtggatttgcttgtggtccttctatggtt
catgcagggtgtggtggccttttggctgcttgtcattccctggatattgctggtgtggag
ttacttgatccactttctgctgatgtccatgcatcttctgtcattggtttgcttcaagca
gacatcaaagtagctttaaaatctgcatttggaaatttggatgggccattgtctatcact
gaatggtgcaaaggacgcaatcaatcaggtgacactgcaggtatcagtggggatggctat
tctcttgaatccactctaactgaagcaaaagatacatcaagttctgtgacactagcttca
gagcccattagtccaccccagtcttcaacatctggttcgtcttttgtcaaagctacagat
ggatctaggttagatgaggggaggataaaccaagaactatgtggttcagagttagagcag
attaataactcccgtctgcggccaacactcatggtggtcccattgccttccatacttgtt
gggtaccaggatgattggctcaagacatcagctagttctttacaactttgggaaaaggct
cctcttgaaccatatgctctgtcaaaacctatgacttactgtgttgtatgcccggacata
ggtcctcttatgtcagctactgctgatttttttcaacaactgggaactgtttatgagagt
tgcaaacttggaagccatttaccccaccaagttagtggaggccagacggaggtggcttct
ggtttttgtcttgttgattgccctcataacttgaaggctacgtgtagtaatttaactttg
atgggttcagtgagtgaatttgttatagctttatccaaaggttgggatgtgagaaacttc
cttgtctctctttccaaagttgtcaaggctcttaaagtaggtttgaactcagcagtaaat
caaaaggaaggagggactggatcttgcttggtaatctatgttgtatgcccattccctgag
cctactgcaatcctgcagacacttgttgagtcatctgttgccctcggatcaagtaccctc
tcatctgacaaagatcgggctttattacactcccaggttgggaaggcttttagttgtaca
gctggtgtggatgagacctcaatatccagcattcttactctttcagggtttagtgttcca
aggttggtcctgcagattgtgaccattgaaaccatttttgttaatgagctatcccttctg
aaggacattgcttttactgtgtataataaggctcggcgtgttccacgaacttcctctagt
gacatgagccagtcatctggtatctcaggcaggacacagtcagcaatgatgaatatgcct
tcttctatgcctggtttgtggaaggattgcatgacctctcgtattactgcatcaactcct
gatctggatgctggtttaaggcctgggacatgggataattcttggcagacatcaaggaca
gggggattaagctgtgaatcaaacagaagtaaagatttcttgtatcaagaagaagttcgc
tacttgtttgaacctcttttcatactggcggagcctggttctgtagatcatggagtatct
attgggcatttggtgtcagagtctccatgttcaagaccagcagctgatgataatattggg
ggttatatgcaaaattcagcttcatctactactgcagatatggggcctgcttctctgctt
gaagggtccgaaactgacagttctgggagcaaccaaaggagcacaagtcttcattgttgt
tatgggtggactgaggattggcgttggttggtctgcatttggacagattctaggggagag
ttattagacagcaatatatttccttttggtgggatcagcagccggcaagatacaaagggt
cttcaaggtttatttgttcaagtcctgcaacaaggttgccaaatactatcatcttcttct
cctgatggtgggacagtcaggcctagggatattgtgatcacacgtattggttgtttctat
gagcttgaatgccaagagtggcagaaagccatctacttcgttggtgggaatgaagtgaag
aagtggccaatacagttacgaagatctatacctgatggagtgccatctggcagtaatggg
acaactttgcagcaacaggacatgagcttaattcaggagagaactctaccttcctctcca
agcccttctttatacagccctcactcaaaaccatccggttttattaaaggtagtttggga
caaagtaattctcggaaacaacatcaagtgggaggacaagcaggagtagacatctccaga
gggctccttcagtgggttcagagcatcagtttagttggactttctgttgatcattccctt
catttggtcttcccagctgacagttatcatctaggtggtggagcacaaagtggtttgggc
ataactttatttaattatcttgaaggcttcagtcctgtaaagtctcttggagcaacacct
gcgtcctacattctcattccttcccccagtatgaggtttcttcctcctgttccgttgcag
cttccaacgtgccttacagctgagtcacctcctcttgcacatcttctacacagtaaagga
tctgcaatccccttgtccactggatttgtggtttcgaaatcagtgccctctgtgagaaga
gattttgcaaaagatgaatggccttcagtcttgtctgtaagtcttgttgattactatggt
gccagcaatctgagtcctcaggaaaagatggtcagaggggtacatactaagcaagcgaga
gttttgaacccagacactagagattacgagatggagattcacatggtcctggaatctgtt
tcagctgagcttcatgctctgtcatggatgacggtgagtccagcatacttggataggcga
acagctttgccttttcactgtgatatggtcctcagattgaggagacttctgcattacgct
gacaagcagttatgtcagtcaacagagaaccaggtttaa
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integrated database retrieval system
