Aristolochia californica: 137935936
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Entry
137935936 CDS
T10486
Name
(GenBank) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
acak Aristolochia californica
Pathway
acak03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137935936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acak03036
]
137935936
Chromosome and associated proteins [BR:
acak03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
137935936
SWR1 complex
137935936
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
HDA2-3
Motif
Other DBs
NCBI-GeneID:
137935936
NCBI-ProteinID:
XP_068636466
LinkDB
All DBs
Position
Unknown
AA seq
2048 aa
AA seq
DB search
MASKGPRSKLEHETRARRQKAFEAPKEPPRPKTHWDHVLEEMVWLSKDFEAERKWKLAQA
KKVAIRASKGMVDQATRGEKKIKEEEQRLKKVALSVCKDVKKFWMKIEKLVLYKHQLELE
ERKKKTLDKQLDFLLDQTERYSTMLAENLVDLPYKERTACLDSGMEQLSSPERKGEGRDP
QSDHVETDGEYGVQSEDQSEDDEHTIEEDEALITEEERKEELAALQDEVDLPLEELLKRY
TNDKVSREGSREGEEESEPSGREENLSKVSAKQVNGTLSPRLEKLSDGESPLKCAEKNPS
GKTNANGLILVASQHCAKSNGEITSPENQTSVASPCHSGHSSGNHKKLDEGYSSIGSGDE
MDDKEYVLTAGDEKDDETTLSEEDELSKGEAMDPVDEIKLLQQESEMPVEELLARYKKDI
QNDEDREVQSECNFTSSEDQQDEDRDGQEKLGDKKVVVEGDRETDEDVRESENIIADAAA
AARSAQPTGNTFQTTKVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGK
TIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKR
QGWLKPNSFHICITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKR
RILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMVEGQEKVNKEVVDRL
HNVLRPFILRRLKRDVEKQLPKKYEHVVFCRLSKRQRNLYEDFVASSETQATLASANFFG
MISIIMQLRKVCNHPDLFEGRPIISSFDMMGIDMQLSSSACTILSSGPFSDVDLNGLSIL
FTPFEFCMTSWEADELAAIATPSSLIKDVPGNLETLFKGRSGSSSTDGSRKKMYGSNIFD
DIQKALREERVKEAKERAASIAWWNSLRCRKRPVYGRDLRELLTIKHPVCDILGQKTNPA
CYLNFSSKLADVILSPLEHFENMVDLIESFMFAIPAARAPFPVCWCSKVGSPVFLQSSYK
EKCMEVFAPLLSSIRPAVVRRQVYFPDRRLIQFDCGKLQELAILLRRLKSEGHRALIFTQ
MTKMLDILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINL
VGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISECTIEENILKKANQKRALD
DLVIQSGGYNTEFFKKLDPMELFSGHRTLAIEKLQKSDTSVTENFNVESGNLSTADVEAA
LKHAEDEADYMALKKVEQEEAVDNQEFTEDAMGRLEEDEFVPEDELKLDEKMIDDKTGWI
VNKEIDGTSSQNPLNEDTDLLLSRRVEDVDMLADVKQMAAAAAAAGQASSSFENQLRPID
RYAMRFLDLWDPIIDKSAIETQVAYEEEEWELDRIEKFKEDMEADIDEDEEPLVYERWDA
DFATEAYRKQVEVLAQRQLLEELEAEAKETEDADDGDENARGEVVAARKGKSKKKSKKTK
FKSLKKGALKSESEALADESPIDPMSIDGRFACPDRESSPIIPALQKKRKKAIAAPEEEK
ISKKSSKKIKKASETSSAIDSCNINKMSHEVKDLKSCEGDLDIKHTSRSKTGGKISITAM
PVKRVLVIKPEKLKKKGSVWSKECIPPPDAWSTQEDAILCAVVHEYSTNWSLVSDTLYSM
PGGGFYRGRYRHPVHCCERFRELCYKYVVSVTECPSDEKFSSSGSGRALLKVSEDHVRTL
LDVASELPDNELLLQKHFKAVISSVWRSRSHFDRLRTLPSASNNACTNEKFLHCATRQLS
GKFSKEFERVNFVIFLQNRKLVATALDGAYMKGQEPIPLGAEQSEPVQEQLEVTLEIQDG
QSESKTSLPSVVNVMIHSANPSESVDEPSPKDSLLPELSCRIAENRLRMASNACFEGEVL
SWASSAFPAGDSMKPRSSSKMQLLGKHKTVPDSIKPPKSKILKVTETSENSSHVNKPVFL
SAVRVPPDALGDISFPPLNMEDEDIFGSAMGNLLEERFDSVPHHYDPCFIMGLDDDCKQL
TKEILDIG
NT seq
6147 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaaaaggtcctaggtctaaacttgagcatgagacaagggctaggcgtcaaaag
gcctttgaagctccaaaggaacctcctcgtcccaagacccattgggatcatgttttggag
gagatggtgtggctatcaaaggactttgaagcagaacgcaaatggaaactagctcaggca
aagaaggttgcaataagagctagcaagggcatggtagaccaagctactagaggggagaag
aaaatcaaggaagaagaacagcgattgaagaaagttgcccttagtgtctgtaaagatgtg
aagaaattttggatgaaaatagagaaactggtgctttacaagcatcagctggagcttgag
gaaagaaagaagaagacacttgacaagcaacttgattttctcttggaccagaccgagagg
tactcaacgatgttagcagagaatctagtggacttgccatataaagaaaggacagcttgc
ctagactctggaatggagcaactgagcagtcctgaaagaaaaggggaaggaagagatcct
cagtcagaccatgttgagacagatggcgaatatggtgtacaatctgaggatcaatctgaa
gacgatgaacatacaattgaagaagatgaagcacttataacagaggaagaacggaaggaa
gagttggctgctttgcaagatgaagtagatctcccactagaagagcttctcaagcgatac
actaatgataaagttagcagggaaggaagccgtgaaggtgaagaagaatccgaaccatct
ggaagggaagagaacctcagtaaggtttctgcaaagcaagtgaatggtactttgtcccca
aggcttgagaaattgtcagatggagaaagccctcttaaatgtgctgagaaaaatccttct
gggaaaactaatgcaaatggcttgattcttgttgcaagtcagcattgcgctaaaagcaat
ggcgaaatcaccagtccagaaaaccagacttcagttgcttcaccttgtcattctggacat
agttcaggaaaccacaaaaagttagatgaaggatattcatcaattggttctggtgatgaa
atggatgataaagagtatgttcttactgctggggatgaaaaggatgatgaaacgaccctg
tctgaagaagatgagttgtcaaaaggagaagccatggatcctgtggacgagattaagtta
ttgcaacaggagagtgaaatgcctgttgaagaacttcttgcaaggtataaaaaggatatc
cagaatgatgaagacagagaggttcaatctgagtgtaatttcaccagttcagaggaccag
caggatgaagatcgagatggacaggagaagctcggtgataaaaaagtggtagttgaagga
gacagagaaactgatgaagatgtcagggagagtgaaaatataattgctgatgcagctgct
gctgccaggtctgcacagcctactggtaacactttccaaacaaccaaagtccgtaccaag
ttccctttcctgctgaagttcccactgcgtgagtaccaacatattggtttggattggctt
gtcaccatgtatgagaagagattgaatggaattctagctgatgaaatgggccttgggaaa
acaattatgactatagctctcctggctcacctagcttgtgaaaagggtatatggggaccc
cacctcattgttgtccctactagtgttatgctcaactgggagactgaattcctcaaatgg
tgtcctgcttttaaaattttgacatattttggaagtgcaaaagaacgaaaattgaaaagg
cagggttggttaaagcccaattctttccatatatgtataacaacttacagacttgttatt
caggactccaaagttttcaaaaggaagaagtggaagtatctaattctagatgaagctcat
ttaataaaaaactggaagtcgcagagatggcaaactctgttaaactttaattccaagcgc
cgaattttgttgacaggaaccccactgcagaatgaccttatggagttgtggtctttgatg
catttcttgatgccacatgtctttcaatctcaccaggaattcaaagattggtttagcaat
cctatctcaggaatggtggagggacaggaaaaggtgaataaagaagttgttgataggttg
cataatgtgcttcgtcctttcatactcaggcggttaaagagggatgtggaaaaacagctt
ccaaagaagtacgaacacgtcgtgttttgcagactctcgaaaaggcagaggaacttatat
gaagattttgttgccagttctgagacacaggcaactctggctagtgcgaatttctttgga
atgattagcattataatgcagcttcgcaaggtctgcaaccatcctgacctctttgaaggt
cgtccaatcattagttcatttgatatgatgggtattgacatgcagttaagttcttctgct
tgtaccattctttcttcgggcccattctctgatgttgatctcaatggtctatcaatcttg
ttcactccttttgaattctgcatgacttcatgggaagctgatgagttggcggcaattgcc
actccctcaagtttaatcaaggatgttcctggtaaccttgagacccttttcaaaggtagg
tctggttcttcaagtacagatggaagtagaaaaaaaatgtatggttcaaatatctttgat
gatatacaaaaggctctcagggaggaaagagtaaaggaggcaaaagaaagggcagcttcc
attgcatggtggaactctttacggtgccgtaagagacctgtttacggcagagacttaagg
gaacttctcaccataaagcatcctgtttgtgatattcttggacagaaaacaaatcctgct
tgctaccttaacttctcgtcaaaattggctgatgttatcctctcaccactggaacacttt
gaaaatatggttgatctaattgagtcttttatgtttgctattccagctgcacgggcccca
tttcctgtttgttggtgtagtaaggtcgggtctccggtgtttttgcaatcatcatacaag
gaaaaatgcatggaggtctttgctcctcttttatcttctattagacctgctgttgtgagg
agacaagtctactttcctgatagacggctaatacaatttgattgtggtaagctacaggag
ttggcaatccttctgaggcgtttaaaatcagaagggcatagagcgttaatatttacacag
atgaccaaaatgcttgatatcctggaagctttcattaatttgtatggttacacttacatg
cgtttagatgggtctacccaacctgaagagaggcaaacacttatgcagagattcaataca
aatccgaaaatttttcttttcattttgtccactcgtagtggaggtgttggtattaacttg
gttggagcagatacagtaatcttttatgacagtgactggaatcctgcaatggaccagcaa
gcgcaggatagatgccacagaattggacagacacgagaagtccatatatatagactaatt
agtgagtgtacaattgaggaaaacatcttaaagaaagcaaatcagaagcgggcactcgat
gatttggttatacagagcggtggatataacactgaattttttaagaagcttgatcctatg
gagttgttttcaggacatagaacacttgcaattgagaagctgcagaaaagtgacacctct
gttactgaaaattttaatgttgaatcaggaaatttatcaactgcagatgtggaagctgct
ttgaaacatgcagaagatgaagcagattacatggctttgaagaaggttgagcaggaagag
gccgtggataatcaagagtttacagaagacgctatggggaggttagaagaagatgaattt
gtacctgaggatgagttaaagcttgatgaaaagatgatagatgacaaaactggctggatt
gtgaataaggaaatagatggtacctcgagtcagaatccccttaatgaagacactgatctt
ctcttgtccagaagagtggaagatgttgatatgctggcagatgtgaagcaaatggcagca
gctgcagctgctgcagggcaagctagttcttctttcgaaaatcagcttcgacccattgat
agatatgcaatgcgttttcttgacctttgggatcctataatagacaaatctgcaattgaa
acacaagtggcatatgaggaagaagagtgggaattggaccgtattgagaaattcaaggag
gatatggaagctgatattgatgaagacgaggaacctttggtctatgaaagatgggatgct
gattttgccacagaggcatacaggaagcaagttgaagtcttagcacagcgccagttactg
gaagaactagaagctgaagctaaagaaacagaagatgcagatgatggggatgagaatgcc
aggggtgaggttgtagctgcgcgtaaaggtaagtcaaaaaagaagtcaaagaagactaag
ttcaagtctttgaagaagggggcccttaaatctgaatcagaagctttagctgatgagtca
ccaatagaccctatgtctattgatggcaggtttgcctgccctgatagagaatcatcacct
attataccagcccttcagaaaaagcgtaaaaaggctatagctgctcctgaagaagagaag
atatcaaagaaaagctcaaagaaaattaaaaaggctagtgaaacaagttcagctatagat
tcctgtaacataaacaagatgagtcatgaagtgaaagacttaaaatcttgtgaaggggat
cttgatattaaacacacgagcaggtctaaaaccggaggtaaaatctccattacagccatg
ccggtaaagcgagttttggtgatcaagcctgaaaagttaaagaagaagggaagtgtctgg
tcgaaagaatgtatcccacctccagatgcatggtccacacaagaggatgccattttgtgt
gctgttgtgcatgagtattctactaactggagcttggtgagtgacacactttacagtatg
cctggaggtgggttttacaggggaaggtaccgacacccagttcattgttgtgagaggttc
agggaactctgctacaaatatgttgtgtctgtcactgaatgccccagcgatgagaaattc
agctcttctggctctggcagggccctcctcaaagtgtcggaggaccatgtccgaacattg
cttgatgtggcaagtgagcttcctgacaatgagctactgcttcagaaacacttcaaagct
gttatttcttctgtatggaggtcaagatcgcactttgatcgccttcgaaccttaccatct
gcaagtaacaatgcctgcaccaatgaaaagtttctgcactgtgctacaaggcagctttct
ggaaaattcagtaaagaatttgagagggtgaattttgttattttcctccagaacaggaag
ttagtagcaacagcccttgatggtgcttatatgaaaggacaggagccaattccgttggga
gcagaacaatctgaaccggttcaagaacagttggaggtaacactggagattcaggatgga
caaagtgaatctaaaacctctttgccgtcagtggttaatgtgatgatacacagcgcaaat
ccatcagaatcagtggatgaaccatcccccaaggatagtttgctgccagaattgtcttgc
agaatagctgagaaccgtttaaggatggcatcaaatgcttgttttgaaggtgaagttctc
agctgggcatcatcagcttttccagcaggtgattctatgaaaccccgttccagttcaaaa
atgcagttgttggggaagcacaagactgttcctgattcaatcaaaccgcccaagtcaaag
atcttgaaagttacagaaacaagtgagaactcctcccatgtcaataaaccagtatttctg
tcagccgttagagttccccccgatgcattaggagatattagttttcctcctttgaacatg
gaagatgaggacatttttggctctgccatgggtaaccttctggaagaaagatttgactca
gttcctcatcattatgatccttgtttcataatgggactcgatgatgattgtaaacagtta
acaaaagaaatcttggatattggatga
DBGET
integrated database retrieval system
