Aristolochia californica: 137935962
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Entry
137935962 CDS
T10486
Name
(GenBank) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
acak Aristolochia californica
Pathway
acak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137935962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acak03019
]
137935962
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137935962
mRNA degradation factors
5'-3' decay
Decapping complex
137935962
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR75_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_Vps41
DUF445
Motif
Other DBs
NCBI-GeneID:
137935962
NCBI-ProteinID:
XP_068636513
LinkDB
All DBs
Position
Unknown
AA seq
1327 aa
AA seq
DB search
MASAGNPNQPTPFDVQKFFKPPSPNPNPNNPPTPFSPPSSYSPPPTSYSAPPTGPFSYPP
QTAAFHHYLPYPPQEPHPNARTVSYPTPPSPSPNLNPNPGARLMALLGNSPSPNVELPSS
SMGSSSEFSLPQSNATILPAVPSAPPIPQPSPARLLSSSKAPKGRNLYGAGKYIKYDIDV
RLPGESQPQLEVTPITKYVSDPALVLGRQIAVNRTYICYGLKLGAIRVLNINTALRALLR
GHTQRVTDMAFFAEEVHLLASASIDGRVFVWKIDEGPDKEDKPQIAGNIVIAIQIVGDGE
SFHPRICWHCHKQEILVVGIGKRVLRIDTTKIGKSETFSAEEPLKCPIEKLIDGVQFVGK
HDGEVTDLSMCQWMTTRLVSASTDGTVKIWEDRKSVPLATLRPHDGQPVNSATFLTCPNR
PDHIVLITAGHLNREVKIWASASWEGWLLPSDVESWQCIKTLELTSSSESRPEEAFFNQV
VVLPRAGLILLANAKKNAIYAVHLDYGLYPSVTIMDYLSEFTVTMPILSLTGTSDSTPGG
DQIVQVYCVQTQAIQQYALNLSQCMASPLLPSDPELAADLDNFLDASEMQAEMDQVHEKM
KNVPDASKPPSSVLSGGLDLAGVEVATSSSESKQTPATTVDSGPTGSSIPLPLSPQLSGK
LSGLRTMSNGFDQSPEVGDQPVVDRRVDAVHANLPDIPPLENSQGGETEVGQNNISVVPT
LSVPFKHPTHLITPSEILCMAVSSSEKTEVQDVVVNKDVESVEVEVKVVGETGSTQHEEF
ETPDGNKEKAIYTQNQVPYIDSARTEIVNEEETCHVSATSEAFEPPSNASEEAQETSKSS
ARKVLESTPVSEITQSPSVGKGKKQKSKPAQVLGPSSSISSFNSTDSSTEPGPSSSIPTL
ESAFSQLLTMQETLNQISVMQKEMQKQMSTVVAAPVTKEGRRVETALGRSMEKTVKANID
ALWARLQEENAKHEKVERERVQQISSSISNFMNKDLPAILERLLKKELSAVGPAVARAIN
PVLEKAISAAIAESFQRGVGDKAVGQLEKSVSSKLEATVARQIQGQFQTSGKQALQDALR
SSLESSVIPAFEMSCKAMFEQVDTAFQKGMAEHTTAAHQQFESVHSPLVMALRDAINSAS
SMTQTLTGELADGQRRFLALAANPEVVNSSGASQGKRPLTVLQVDPPLDPTQELQRLVSE
RKFGEAFTEALQRSDVSIVSWLCSQVDLLGILTMVPLPLSQGVLLALLQQLSCDLVNETP
RKLEWMRDVALAINPVDPTIALHIRPIFEQVYQILGHHRSLPIITPAEATNVRLVMHVIN
SVLMGCK
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcgggaaaccctaaccaaccaaccccttttgacgtgcagaagttcttcaaa
cctccaagccctaatcccaaccctaataacccgccaacgcccttctctcccccctcttct
tattctccgcctcctacgtcctactctgcgccaccgaccgggcccttctcctacccgccc
cagactgcggctttccaccactacctcccttacccacctcaggagccccaccctaatgca
cgcactgtctcttatcctacgccgccttctcccagccctaaccttaatcctaatccaggc
gcgaggctcatggcccttctcggcaactctccctctcccaacgttgaacttccctcctct
tcgatgggctcatcttccgaattctctctcccccagagcaacgccacgatcttaccggct
gtgccctctgctccgcctattccgcagccttcacctgcgagattactctcgagcagtaag
gcgcccaaagggcgaaatttgtatggtgctggcaaatacatcaagtatgatatcgacgtc
aggttgccgggagaatctcagccgcagctcgaggtcacgccgattacaaaatatgtttcg
gatccagccttggttctgggccgtcaaattgcagttaataggacttacatttgttacggg
ttgaagttaggggcaattcgggttcttaatattaatacagcattgcgagctttgctgcga
ggtcatacgcagcgagtcaccgacatggctttctttgctgaagaagttcatcttttggct
agtgcaagcatagatgggagagtttttgtgtggaagattgatgaagggcctgataaggaa
gacaagccacagatagcaggaaatatagtaattgccattcagatagtgggagatggggaa
tcatttcaccctcgaatatgttggcactgtcacaaacaagaaatcttagttgttggaatt
ggaaaacgcgtgcttaggattgacacgacaaaaattggtaaaagtgaaaccttttcagca
gaagagcccttgaaatgtcccattgagaagctgattgatggggtccagtttgttggtaag
catgatggggaagtgactgatttgtcaatgtgccaatggatgactacccgattggtttca
gcatcaacggacggcacggttaagatttgggaggacaggaaatcagtgccccttgccaca
ctgaggccacatgatggtcaacctgttaattcagcgacattcttaacatgccccaaccgt
cctgatcacattgttctgataactgcgggtcatctgaatagagaagttaaaatctgggcc
tctgctagttgggaaggttggcttttgcctagtgatgtggaatcatggcaatgcattaag
acattggagttgactagttcttctgaatctcgaccagaggaggctttctttaatcaagtt
gtggttttgcctcgtgctggccttattttacttgcaaatgctaaaaaaaatgctatttat
gcagtacatctggactatggtttatatccgtctgttaccattatggattatttatcggag
tttactgtcacgatgcccattttgagtctcacaggaacaagtgacagcactcctggtggg
gatcaaatagtgcaggtttactgtgtccaaacacaggccattcaacagtatgctttgaat
ttatctcagtgcatggcatctccactgttaccttcagaccctgagttggctgctgatctg
gataatttccttgatgcatctgagatgcaagctgagatggatcaggttcatgagaaaatg
aagaatgtgcctgatgcatcaaaacctccatcatctgtgttatcaggtggtttagacctt
gctggtgttgaagtggctacttcaagttcagagtccaagcaaacacctgctaccacagtt
gacagtggtcctactggatcatcaatacctctgccattgagccctcaattgtcggggaag
ctgtcagggctcaggacaatgtcaaatggatttgatcagagccctgaagttggagatcag
ccggtagttgacaggagagtggatgctgttcatgcaaatttgcctgacatccctccattg
gagaactcacaaggaggcgaaactgaagtgggacaaaacaatatttctgtggtacctact
ctttcagttcctttcaaacacccaacccacctgataactccttcagaaatattatgtatg
gccgtttcttcatccgagaagacagaagttcaagatgtggtggtgaacaaagatgtggaa
agtgttgaagtggaagttaaagttgtgggtgagacaggatctactcagcatgaggaattt
gaaactcctgatgggaacaaagaaaaagctatctacactcagaatcaggtcccttacatt
gactcagccaggacagaaattgtcaatgaggaggaaacctgccatgttagtgcaacttct
gaggcttttgaacctccttcaaatgcgagtgaagaagctcaagaaacttcaaaaagttct
gccagaaaagttcttgaatcaactcctgtatcagaaattacccaatctccttcagttggg
aaagggaaaaagcaaaaaagtaaaccagctcaagttttgggtccgtcatcttccatcagc
tctttcaactcaacagattcttctactgaaccaggtcctagctccagcattccaacatta
gagagtgctttctcacagctcttgactatgcaggagactttgaatcagatttcagtaatg
caaaaggaaatgcagaagcagatgagtacagtagtagctgctccggttaccaaagaaggt
agaagagtggagacagcccttggtcgcagcatggagaaaactgttaaggccaatattgat
gctttgtgggctcgtcttcaagaggagaatgcaaaacatgagaaagtagaaagggaacgt
gttcagcagatatcgagttcgatctcaaactttatgaacaaagacttacctgcaattcta
gagcgtttactgaagaaagaactctctgctgtcgggccagctgtagctcgtgctatcaat
ccagtcctggaaaaagccatttctgctgctattgcagagtcattccagaggggtgtggga
gacaaagcagttggtcagctggaaaaatcagttagttcaaaacttgaagcgacagtagca
aggcaaattcaaggacagtttcaaacctctggcaagcaagctcttcaggacgcattaaga
tcaagcctggagtcctcagtcatacctgcatttgaaatgtcatgcaaggcaatgtttgag
caagtggatactgcctttcagaaaggaatggctgaacatacgactgctgcacatcagcag
tttgagtctgttcattctccattagttatggctttaagggacgcaattaactctgcatca
tcaatgactcaaactttaaccggtgaattagctgatggccaacgcaggtttttagctctt
gcagcaaacccagaagtcgtgaattcctcgggtgcatcgcaaggcaagcgccctttgact
gttctccaggttgacccccccttggatccaacacaagagctgcagagattggtctcagaa
cgtaaatttggggaagccttcactgaagctcttcagagaagtgatgtatcaattgtatcg
tggttatgttctcaggttgatttgctgggtattttaaccatggttccgcttcctctgagc
caaggagttcttttagctcttctccagcagctgtcctgtgatcttgtgaacgaaacaccc
agaaagctggagtggatgagagatgttgcccttgccataaatcctgtagatcctactatt
gctcttcatatacgccccatttttgagcaggtataccagatcttgggtcatcatcgctca
ctccccataattacacctgccgaagcaactaacgttcgccttgtcatgcatgtcatcaat
tctgtattgatgggctgtaaatga
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integrated database retrieval system
