Aristolochia californica: 137936042
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Entry
137936042 CDS
T10486
Name
(GenBank) transcription initiation factor TFIID subunit 6-like isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
acak Aristolochia californica
Pathway
acak03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137936042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acak03021
]
137936042
03036 Chromosome and associated proteins [BR:
acak03036
]
137936042
Transcription machinery [BR:
acak03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
137936042
Coactivators
SAGA/TFTC/STAGA complex
137936042
Chromosome and associated proteins [BR:
acak03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
137936042
STAGA complex
137936042
TFTC complex
137936042
SAGA complex
137936042
SLIK complex
137936042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
CBFD_NFYB_HMF
Histone
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
137936042
NCBI-ProteinID:
XP_068636652
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MSIVPKETIEVIAQSIGINNLSSDVALALAPDVEYRVREVMQEAIKCMRHSKRTILTADD
VDSALSLRNVEPIYGFASGDPLRFKRAVGHKDLFYIDDRDVEFKDVIEAPLPKAPLDTAV
TVHWLAIEGVQPAIPENAPVEALVAPSENKKFEQGKEDGLPVEIKLPVKHVLSRELQLYF
DKITELIVSKSDSDLFKKALISLATDSGLHPLVPYFTFFIADEVTRSLNDFPLLYALMRV
VRSLLQNKHIHIEPYLHQLMPSVITCLVAKRLGNRLCDNHWELRDFTANLVTLICKRFGH
AYHNLQPRVTRTLLHAFLDPMKALTQHYGAIQGLAALGPSVVRLLILPNLEPYMKPLEPE
MLLESQKNEIKRREAWRVYDALLHAAGLCLYERLKLFPNLLSPPARSVWHNNVRVVTTRP
DKRKASNDLLSQQPPLKKVATDGSLGSISIVGDLQQGPPVAGDAFRAISGESEIGQSSSS
GQISNSNESYSGGNRREKAGRRGSNMSAVLMQAWKEDVDAGHLLASLYELFGEGIFSFTP
SPEMSFFL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgtgcctaaggaaacgattgaggttattgctcagagtattggtatcaacaac
ttatcctcagatgtggcacttgcgcttgctcctgatgtggagtatcgtgtgcgagaggtc
atgcaggaggccatcaagtgcatgcgtcactcaaagagaaccattctgacagcagatgat
gttgatagtgctcttagtttaagaaacgtggagccaatttatggttttgcatctggcgat
cctctgagatttaaaagagctgtcggtcataaggatttattctacattgatgacagagat
gttgagtttaaagatgtgattgaagctcctctaccaaaagcaccacttgatactgcggtc
actgttcattggctagctattgaaggtgttcaaccagcaattcctgagaatgctccagtt
gaagcacttgtagctccttcagaaaataaaaagtttgaacaagggaaggaggatggactt
cctgttgagataaagctgcctgtcaagcatgtattatcaagagaactccagctatacttt
gataagatcacagagcttattgtcagtaaatcagactcagatctctttaagaaagcactc
attagtttagcaacagattctggactccatcctcttgttccttatttcactttcttcatt
gccgacgaggttactcgtagtttgaatgactttcccctgttgtatgctctcatgcgcgtt
gtccgaagccttctccagaataaacatatacatatagaaccttatttgcatcaattgatg
ccatctgttattacttgccttgttgccaaaaggttgggtaacagactttgtgacaaccat
tgggagctaagagactttactgcaaacctcgttactttaatatgcaaaagatttggccat
gcatatcataatctgcagcctcgtgtaaccagaactttgctccatgcatttttagacccc
atgaaagcactgacgcaacattatggagctatccaaggtcttgctgcacttggacccagt
gtggtgcgtcttctaatcctgcctaatcttgagccatatatgaaacctttggagccagaa
atgttgcttgagagtcaaaagaatgagataaagaggcgtgaagcatggagggtgtatgat
gctttattgcatgcagcaggtctttgcttgtatgaacggctcaagttgtttccaaatttg
ctatcaccaccagcacgttctgtgtggcataacaatgtgagagtggtgactactagacca
gataagcgtaaagcaagcaatgatctcttgtcccaacagcctcccctcaagaaagtggcc
actgatggttcattgggaagcatttccatagtgggtgatttgcagcaagggccaccagta
gcaggagatgcatttcgtgccatttcaggagagtctgagattggccaatcatcttcttct
ggacaaatttctaattcaaacgaaagttattcaggcgggaacagaagagaaaaggcgggt
aggcgaggctcaaatatgtcagcggttctgatgcaagcttggaaagaagacgtggatgca
ggccatctcttggcttcactttatgagctctttggtgaaggtatattttctttcacgcct
tcgccggagatgtcattcttcctatga
DBGET
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