Aristolochia californica: 137936043
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Entry
137936043 CDS
T10486
Name
(GenBank) ATP-dependent RNA helicase-like protein DB10
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
acak Aristolochia californica
Pathway
acak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137936043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acak03041
]
137936043
03009 Ribosome biogenesis [BR:
acak03009
]
137936043
Enzymes [BR:
acak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137936043
Spliceosome [BR:
acak03041
]
Complex A
U1 snRNP components
U1 related factors
137936043
Complex B
137936043
Ribosome biogenesis [BR:
acak03009
]
Eukaryotic type
Pre-60S particles
Helicases
137936043
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
137936043
NCBI-ProteinID:
XP_068636656
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MAATASASSSGPRYAPHDPTLPNPWKGLVDGNTGYLYFWNPETNVTQYERPGSSSFTGPA
VPKTASISSSIHIQQSSGSPAQAQQKRNDEDNRYNGVSNGGAKPVAAPASRSHQGSRINS
HLQDFPNGSISGGSNAYNSGSSGQISKSTARQRGPADVGSASSVESYCLQHEITISGDDV
PAPFMTFESTGFPSEILKEVHHAGFSAPTPIQAQTWPIALRNRDIVAIAKTGSGKTLGYL
IPAFIHLKRLRNNSQMGPTVLVLSPTRELATQIQDEAVKFSRSSRISCTCLYGGAPKGPQ
LRDIDRGTDVVVATPGRLNDILEMRRISLRQVSYLVLDEADRMLDMGFEPQIRKIVKEIP
TRRQTLMYTATWPKEVCKIAADLLINPVQVNIGKIDELVANKSITQYIEIITPMEKQRRL
EQILRSLEPGSKVIIFCSTKRMCEQLSRTLTRTFGAAAIHGDKSQGERDYVLSQFRTGRS
PVLVATDVAARGLDIKDIRIVFNYDFPTGIEDYVHRIGRTGRAGATGVAHTFFCEQDAKY
ASDLIKVLEGAGQRVPPELRDMGGRGGGRLRRPWGSGAGGGGGRDGGRTYGGGRNESSFG
GRGGRGAPSSAGGWSDRGLGGRGRNHWDDRDRYDRGGHYDDARGRYDISERQTGDKVARV
RSRSRSFSPRPKSSGWGAGNNSPSSKSRNCGHSRSRSRSLDRFSGGPQVNGRSPGSVKEV
RSPIDSEDVRGNEPPRVGGSPRESIRLPRQWGKSPSLPPCHVEGFGDGVSLPSAVRPESH
YRTDEDEEGMIPLEEDGVIIP
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggctgctactgcatctgctagttccagtggtccacgatatgcaccacatgacccgaca
ctccccaatccttggaaaggtctggtagatgggaacacaggatacctttacttttggaac
ccagagactaatgttacccaatatgaaagacctggatcaagctcatttactggtcctgct
gttcccaagactgcatccataagctcatccattcatattcagcagtcatcaggttctcca
gctcaagctcagcagaagcgtaatgatgaggataatcgatacaatggtgttagtaatggt
ggagccaagcctgtggcagctcctgcctctcggagccatcagggttcaaggatcaattct
catttacaggatttcccaaatggttcaatcagtggaggttctaatgcctacaactctggt
tccagtggacagatctctaaatcaactgctagacagcgtgggccggcagatgttggcagt
gcttcatctgtagagtcatattgtcttcaacatgaaataactatctctggagatgatgta
ccagccccattcatgacatttgagtcaacaggatttccatctgagattcttaaggaggta
caccatgctgggttctctgcacccaccccaatccaggcccagacatggccaattgcctta
cggaaccgtgacattgttgctattgcaaagacaggttctggtaaaactttaggttatctt
attcctgcatttattcatctcaagcggttgcgaaacaacagtcaaatgggtcctactgtc
ttggtcctgtcacctacaagggaattggccacgcagatccaagatgaagctgtgaagttc
agtagatcctcaagaatttcatgcacgtgtttgtatggaggtgcaccaaaaggtcctcaa
ctaagagatattgaccgtggaacagatgttgttgttgcaacacctggacgacttaatgat
attctggagatgaggagaattagccttaggcaagtttcatacttggtgctggatgaggca
gatcgcatgctggacatgggttttgagcctcagataaggaaaattgtaaaggagatacct
actcgtcgccagactctaatgtatactgctacatggccaaaagaggtctgcaagattgct
gcagatttactgattaatcctgtgcaagtgaacattggcaaaattgatgagcttgttgcg
aacaagtctataactcagtacattgaaatcataacacccatggagaagcaacggcgattg
gaacagatcttgcgatctctagaacctggttctaaggtcatcattttctgttcaaccaag
aggatgtgtgaacaactttcacgcactctcacgaggacatttggtgcagcagctattcat
ggagacaaatctcaaggggaacgtgattatgttttgagccagtttcgtacagggagatct
ccagttcttgttgctaccgatgtggctgctagagggcttgatatcaaggacatccggatt
gttttcaactatgatttcccaactggaattgaagattatgtccacagaattggaaggaca
gggagagcaggtgctactggcgtggcccatactttcttctgtgaacaggatgcaaaatat
gcttcagatctgatcaaggttttagaaggagcaggacagcgagttcctccagagttgcgt
gatatgggtggacgtggtggtggcaggctacgccgtccctggggctctggtgccggtggt
ggtgggggtcgtgatggtggccgaacttatggaggtggtcgcaatgagtctagttttgga
ggaagaggtggtcggggagcaccttcctctgctggaggctggtcagataggggcctaggt
ggacgagggcgcaatcattgggatgatcgtgacaggtatgaccggggaggtcattatgat
gatgcacgtggtagatatgatattagtgaacgacaaacaggtgataaggtggcccgtgtt
cgcagtaggagccgaagctttagtccaaggcctaaaagtagtggatggggagcaggaaac
aacagcccaagtagcaagagcaggaattgtggccatagccgaagcagaagccgcagctta
gacaggttcagtggtggtcctcaagtaaatggacgatctcctggttccgtgaaggaagtt
cgttccccaattgatagtgaggatgtgagaggaaatgagcctccacgcgtggggggctct
ccacgggaaagcatacggttaccaaggcaatggggtaaatctccttccctcccaccttgt
catgtggaagggtttggtgatggtgtcagtttgccatctgcagtgaggcctgaatctcat
tatagaacggatgaagatgaagagggcatgattccactggaggaggatggtgttattatt
ccctaa
DBGET
integrated database retrieval system
