Aristolochia californica: 137936057
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Entry
137936057 CDS
T10486
Name
(GenBank) actin cytoskeleton-regulatory complex protein PAN1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
acak Aristolochia californica
Pathway
acak03013
Nucleocytoplasmic transport
acak03015
mRNA surveillance pathway
acak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137936057
09122 Translation
03013 Nucleocytoplasmic transport
137936057
03015 mRNA surveillance pathway
137936057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acak03019
]
137936057
03041 Spliceosome [BR:
acak03041
]
137936057
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137936057
Spliceosome [BR:
acak03041
]
Complex C
Other components
EJC/TREX
137936057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
137936057
NCBI-ProteinID:
XP_068636676
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MSSNYVVLDNRPVDQWKVTELKEELKRRKLVTKGLKEDLVRRLDAAVRNEMESAKEKLEN
DVVNPDLISLVVPNEDKIHEQTVDGAGGSIASNIEKPKDDVSMVDIDINTADIDQETKVQ
ELESSGDMHTNKVAVDATENVVSIETSAVDNQGVLNQEEFSREKESTNDDMQGEDEKTSK
ASPSEDVKPNISDDPNDNQVSEVSPVLATHSVSINEKNELKDNLNADNFHLELENVKPDK
VVQELSSNEAPSVGDDLLPLDDDQEPGGNQASAEMTDDMNVSNVNCSKKNDGADGGFLEK
LNLDRSSGDDSLEEDVMDSKQTDSNHNSDGAVDKIEIGESPALKVDNSVDVVSESVSEKK
NVLGEKNSQGIASEKRKLEDKETVVNNDPVKRQRRWSSETSKISESPNSSQTPSSTPRDI
FPKRTFNRSDSTNSRDTPKERVVPPLQKPATNSLRIDRFLRPFTLKAVQELLAKTGTVTD
FWMDHIKTHCYVTYSSVEEAVETRNALYNLQWPPNGGRLLVAEFVDAQEVKARLEAPPPS
PAPISTPTTPTPVAPIQPSPRQNAVRQHLPPPPPLPPPPTLETPPAREKVILPPPPPKKP
DPPIVTLDDLFRKTKATPRIYYLPLSEEQVAAKLAAQGRK
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaattatgtggttcttgataaccgacctgttgatcaatggaaggtgacagag
ttgaaggaagagcttaagaggcggaagctggtgacaaagggtttgaaggaggatctggtg
agacgattggatgcagctgttcggaatgagatggagtctgccaaagaaaaattggaaaac
gatgttgtgaatcctgatttgatatccctagttgtgccaaatgaagacaagatacatgag
caaactgttgatggtgctggcggaagcattgcaagcaatattgaaaagcctaaggacgat
gtcagcatggttgacatagatattaatactgctgacattgatcaagaaactaaagtacaa
gaattggagtcaagtggcgatatgcatacaaataaggtggctgtagatgcaacagagaat
gtggtttcaatagaaaccagtgctgttgataaccaaggtgtgcttaatcaggaagagttt
agtagggaaaaagagtccacgaatgatgacatgcagggagaggatgaaaaaacttcaaag
gcttccccttccgaagatgtcaagcccaacatttctgatgatccaaatgataatcaggta
tctgaggtcagccctgttttagctactcattctgtgtcaattaatgaaaagaatgaacta
aaggataatttgaatgctgataatttccatttagaactagaaaatgttaagccagataag
gtggtgcaagaactgtcatccaatgaggccccttctgtgggagacgatcttctaccattg
gatgatgatcaagagcctggtggaaatcaggcttcagcagagatgactgatgacatgaat
gtttccaatgtcaactgtagcaagaaaaatgatggtgcagatggggggtttttggaaaaa
ttaaacttagatcgaagttctggtgatgattcattggaagaggatgtaatggacagtaaa
caaaccgattccaatcataattctgatggagcggtagataagattgagattggagagtcc
cctgctctgaaggtggataactctgttgatgtggtgtctgagtccgtttctgagaagaag
aatgttcttggtgaaaagaatagtcaggggattgcgtctgagaaaagaaaacttgaagat
aaagaaacagtggtaaataatgaccctgtgaagaggcagcggcgatggagctcagaaaca
tcaaaaatttctgaatcaccaaactcgagtcagaccccttcaagcacacctcgtgacata
tttcctaagcgtacatttaatcggtctgactccaccaacagtagagataccccaaaagag
cgtgttgttccaccattgcagaagccagcgacaaattctttgagaattgatcgttttctg
cggccatttactctgaaagctgttcaggagcttcttgctaagactgggactgtgactgat
ttttggatggaccatattaagactcattgctacgtaacatattcatcagttgaagaagca
gtagagacccgaaatgccctgtacaacctgcaatggccaccaaatggaggacgtttactt
gtggcagaatttgtggatgctcaagaagtgaaggcacgactggaagctcctccaccatct
ccagcacctatcagcactcctacaactccaacaccagtggctccgatccaaccttcacct
cgtcaaaatgctgtcaggcagcacctaccgccaccaccacctcttccaccaccaccaaca
ttagaaacccccccagccagagaaaaggtcattcttccacctccgccccctaagaaaccg
gatcctcctattgttacacttgatgatctcttcaggaaaacaaaggcgaccccaagaatc
tactacttgcctctatccgaggaacaggttgcagcaaagcttgcagcacaagggagaaag
tga
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