KEGG   Aristolochia californica: 137936262
Entry
137936262         CDS       T10486                                 
Name
(GenBank) DNA mismatch repair protein MSH2 isoform X1
  KO
K08735  DNA mismatch repair protein MSH2
Organism
acak  Aristolochia californica
Pathway
acak03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acak00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    137936262
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acak03400]
    137936262
DNA repair and recombination proteins [BR:acak03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     137936262
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I ATG17_like
Other DBs
NCBI-GeneID: 137936262
NCBI-ProteinID: XP_068636946
LinkDB
Position
Unknown
AA seq 935 aa
MEDTEHNKLPELKLDAKQAQGFISLFKTLPQDARAVRFFDRRDYYTVHGENATFIAKTYY
HTTTALRQLGSGSDGLSSVSVSKNMFETIARDLLLDRADHTLELYEGSGSNWRLTKAGTP
GNLGHFEDVLFANNDMQDSPVIVALYPNLRENECTIGMGFIDMTKRTLGLAEFLDDSQFT
IMESALVALGCKECLLPNEVGKKTEIKILHDALARCGVLLTERKKSEYKTRDLVQDLSRL
IKGTIEPVRELLSNHQFASGALGALLSYAELLSDDSNYGNYTLQKYNPDSYMRLDSAAMR
ALNVLEGKTDANKNFSLFGLMNRTCTAGMGKRLLNRWLKQPLLDVKEINYRLDLVQAFVE
DTALRLDLRQHLKRISDIDRLMHNLEKRRAGLQHIVKLYQSSIRLPYIKTALERYEGQFS
SLIKERYLGPFDYWTDDDHLNKFIGLVEASVDLDQLDNGAYMISSGYDPNLSSLKNERDA
VEKQIHNLHKQTADDLDLPIDKALKLDKGTQFGHVFRITKKEEPKVRKKLSSQYIVLETR
KDGVKFTNTKLKKLGDHYQKLLDEYTSCQKELVSRVVQTAATFSEVFESVAGLLSELDVL
LSFADLVTSCPTPYIRPDITPSDEGNIILEGSRHPCVEAQDGVSFIPNDCRLVRGKSWFQ
IITGPNMGGKSTFIRQVGVNVLMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVSTF
MQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVTKAPTLFATHFH
ELTALAHEDVDHERSIVGVANYHVGAHIDESCRKLTMLYKVEAGACDQSFGIHVAEFANF
PESVVALAREKAAELEDFSSIADGEQQEQVGCKRKRVYNPDDTVKGAACARQFLQEFADL
PLDRMDLTEVLKRVSTLRCDLERDAADSPWLQQFF
NT seq 2808 nt   +upstreamnt  +downstreamnt
atggaagatactgaacacaacaagctgccagagctaaagcttgatgccaagcaagctcaa
gggttcatttcccttttcaaaacccttcctcaggatgctagggctgttcgcttctttgac
cgtcgggactattacactgttcatggggagaatgcaactttcattgcaaagacatactat
catacaactactgctttacggcagctgggaagtggttctgatggtctttccagtgttagt
gtgagcaaaaacatgtttgaaactattgctcgtgatctcctgctggatagggctgaccac
acgttggagctttatgaaggcagtggatcaaattggagattaacaaaggctggaacgcct
ggcaatcttggtcattttgaagatgttttatttgccaacaatgacatgcaagattcccca
gtcatagtcgcactgtatcctaatttgcgagaaaatgaatgcactatagggatgggtttc
atagatatgaccaaaagaactcttgggttggccgagttccttgatgacagccaattcaca
attatggagtctgccttggtggctcttggatgcaaggaatgcttactaccaaatgaggtt
ggaaaaaaaactgaaataaaaattcttcatgatgctttagccagatgtggagtgcttttg
actgagagaaaaaaatctgagtataagacaagggatttggtgcaggatcttagtaggctt
attaaaggtactatagaaccagtgcgggaactactttcaaatcatcaatttgcttctggg
gctctaggggccttgctttcatatgcagaattactttcagatgacagcaactatggaaat
tacactctccaaaagtacaaccctgacagttatatgaggttagattctgctgccatgaga
gcactgaatgttctcgagggtaaaactgacgcaaacaagaatttcagtttgtttggtctg
atgaataggacttgcactgctggcatgggaaagcggttgttgaataggtggctaaagcaa
cctctattggatgtgaaagaaatcaactatagactggacctggtgcaagcatttgttgag
gatacagctcttcgccttgacttgcgacaacatttaaagagaatttcagatattgatcga
ttgatgcataatcttgagaagaggagagctgggttgcagcatattgttaaactttatcag
tcaagcatcaggcttccgtacataaaaactgctctagagagatatgaaggacaattttca
tcgttgataaaggaaagatatttgggtccatttgattactggactgatgatgaccacttg
aacaagtttattggtctcgttgaagcttctgttgaccttgaccaacttgacaatggggcg
tacatgatatcttctggttatgacccaaatttatcttctttgaagaatgaacgagatgct
gtggagaaacagatacacaatttgcacaaacaaacggcagatgatcttgacctccctatt
gataaggctttgaagttagacaaagggacccaatttggacatgtatttagaatcacaaag
aaggaagagccaaaagtcaggaaaaagctaagcagtcagtatattgtccttgaaactcgg
aaggatggtgttaagtttacaaacacaaagcttaagaaattaggggatcactatcaaaag
ttgcttgatgaatacacaagttgtcagaaagagcttgtttctcgagttgttcaaactgct
gcgactttttctgaggtctttgaatctgtagctggtttgctctctgaattggatgtcctg
ctcagttttgctgatctggtcactagttgtccaactccttatataagaccagatatcact
ccttcagatgaagggaacatcattttggaagggagtaggcacccctgtgtggaggctcag
gatggtgtcagttttataccaaatgattgtagacttgtgaggggaaagagttggtttcag
atcattacaggtcctaatatgggtgggaaatcaacatttattagacaggttggtgtgaat
gtgctcatggcccaagttggttgctttgtgccttgtgataaggcaagcataagtgttcga
gattgcatatttgctcgagttggtgctggagattgccaacttcgtggggtctcaactttc
atgcaagaaatgcttgagacagcatcaatcctgaaaggagctacagataagtcactaata
attattgacgagttaggccgtggtacttcaacttatgatggttttggattggcctgggct
atttgtgagcatcttgtggaagtgacaaaggcaccgactttgttcgcgacacactttcac
gagttgactgcattagctcacgaagatgttgaccatgagaggtccattgttggtgtagca
aattaccatgttggagctcacattgatgaatcatgtcgcaaactgaccatgctttacaag
gttgaggccggagcatgtgatcaaagctttggaattcatgtagctgagtttgccaacttt
cctgaaagtgttgttgcactagctagggaaaaagctgcagagttggaagatttttcttct
attgcagatggggagcaacaggagcaggttggatgtaagcgcaagcgggtgtataatcct
gatgacacggtgaaaggcgctgcttgtgcacgtcaatttctgcaggaatttgcggatctt
cccctggatcgaatggacttaactgaggttcttaaaagagtgagcacattgaggtgtgat
ttagagagagatgcagcagactctccatggcttcagcagttcttttag

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