Aristolochia californica: 137936262
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Entry
137936262 CDS
T10486
Name
(GenBank) DNA mismatch repair protein MSH2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
acak Aristolochia californica
Pathway
acak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
137936262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acak03400
]
137936262
DNA repair and recombination proteins [BR:
acak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
137936262
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
ATG17_like
Motif
Other DBs
NCBI-GeneID:
137936262
NCBI-ProteinID:
XP_068636946
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MEDTEHNKLPELKLDAKQAQGFISLFKTLPQDARAVRFFDRRDYYTVHGENATFIAKTYY
HTTTALRQLGSGSDGLSSVSVSKNMFETIARDLLLDRADHTLELYEGSGSNWRLTKAGTP
GNLGHFEDVLFANNDMQDSPVIVALYPNLRENECTIGMGFIDMTKRTLGLAEFLDDSQFT
IMESALVALGCKECLLPNEVGKKTEIKILHDALARCGVLLTERKKSEYKTRDLVQDLSRL
IKGTIEPVRELLSNHQFASGALGALLSYAELLSDDSNYGNYTLQKYNPDSYMRLDSAAMR
ALNVLEGKTDANKNFSLFGLMNRTCTAGMGKRLLNRWLKQPLLDVKEINYRLDLVQAFVE
DTALRLDLRQHLKRISDIDRLMHNLEKRRAGLQHIVKLYQSSIRLPYIKTALERYEGQFS
SLIKERYLGPFDYWTDDDHLNKFIGLVEASVDLDQLDNGAYMISSGYDPNLSSLKNERDA
VEKQIHNLHKQTADDLDLPIDKALKLDKGTQFGHVFRITKKEEPKVRKKLSSQYIVLETR
KDGVKFTNTKLKKLGDHYQKLLDEYTSCQKELVSRVVQTAATFSEVFESVAGLLSELDVL
LSFADLVTSCPTPYIRPDITPSDEGNIILEGSRHPCVEAQDGVSFIPNDCRLVRGKSWFQ
IITGPNMGGKSTFIRQVGVNVLMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVSTF
MQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVTKAPTLFATHFH
ELTALAHEDVDHERSIVGVANYHVGAHIDESCRKLTMLYKVEAGACDQSFGIHVAEFANF
PESVVALAREKAAELEDFSSIADGEQQEQVGCKRKRVYNPDDTVKGAACARQFLQEFADL
PLDRMDLTEVLKRVSTLRCDLERDAADSPWLQQFF
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggaagatactgaacacaacaagctgccagagctaaagcttgatgccaagcaagctcaa
gggttcatttcccttttcaaaacccttcctcaggatgctagggctgttcgcttctttgac
cgtcgggactattacactgttcatggggagaatgcaactttcattgcaaagacatactat
catacaactactgctttacggcagctgggaagtggttctgatggtctttccagtgttagt
gtgagcaaaaacatgtttgaaactattgctcgtgatctcctgctggatagggctgaccac
acgttggagctttatgaaggcagtggatcaaattggagattaacaaaggctggaacgcct
ggcaatcttggtcattttgaagatgttttatttgccaacaatgacatgcaagattcccca
gtcatagtcgcactgtatcctaatttgcgagaaaatgaatgcactatagggatgggtttc
atagatatgaccaaaagaactcttgggttggccgagttccttgatgacagccaattcaca
attatggagtctgccttggtggctcttggatgcaaggaatgcttactaccaaatgaggtt
ggaaaaaaaactgaaataaaaattcttcatgatgctttagccagatgtggagtgcttttg
actgagagaaaaaaatctgagtataagacaagggatttggtgcaggatcttagtaggctt
attaaaggtactatagaaccagtgcgggaactactttcaaatcatcaatttgcttctggg
gctctaggggccttgctttcatatgcagaattactttcagatgacagcaactatggaaat
tacactctccaaaagtacaaccctgacagttatatgaggttagattctgctgccatgaga
gcactgaatgttctcgagggtaaaactgacgcaaacaagaatttcagtttgtttggtctg
atgaataggacttgcactgctggcatgggaaagcggttgttgaataggtggctaaagcaa
cctctattggatgtgaaagaaatcaactatagactggacctggtgcaagcatttgttgag
gatacagctcttcgccttgacttgcgacaacatttaaagagaatttcagatattgatcga
ttgatgcataatcttgagaagaggagagctgggttgcagcatattgttaaactttatcag
tcaagcatcaggcttccgtacataaaaactgctctagagagatatgaaggacaattttca
tcgttgataaaggaaagatatttgggtccatttgattactggactgatgatgaccacttg
aacaagtttattggtctcgttgaagcttctgttgaccttgaccaacttgacaatggggcg
tacatgatatcttctggttatgacccaaatttatcttctttgaagaatgaacgagatgct
gtggagaaacagatacacaatttgcacaaacaaacggcagatgatcttgacctccctatt
gataaggctttgaagttagacaaagggacccaatttggacatgtatttagaatcacaaag
aaggaagagccaaaagtcaggaaaaagctaagcagtcagtatattgtccttgaaactcgg
aaggatggtgttaagtttacaaacacaaagcttaagaaattaggggatcactatcaaaag
ttgcttgatgaatacacaagttgtcagaaagagcttgtttctcgagttgttcaaactgct
gcgactttttctgaggtctttgaatctgtagctggtttgctctctgaattggatgtcctg
ctcagttttgctgatctggtcactagttgtccaactccttatataagaccagatatcact
ccttcagatgaagggaacatcattttggaagggagtaggcacccctgtgtggaggctcag
gatggtgtcagttttataccaaatgattgtagacttgtgaggggaaagagttggtttcag
atcattacaggtcctaatatgggtgggaaatcaacatttattagacaggttggtgtgaat
gtgctcatggcccaagttggttgctttgtgccttgtgataaggcaagcataagtgttcga
gattgcatatttgctcgagttggtgctggagattgccaacttcgtggggtctcaactttc
atgcaagaaatgcttgagacagcatcaatcctgaaaggagctacagataagtcactaata
attattgacgagttaggccgtggtacttcaacttatgatggttttggattggcctgggct
atttgtgagcatcttgtggaagtgacaaaggcaccgactttgttcgcgacacactttcac
gagttgactgcattagctcacgaagatgttgaccatgagaggtccattgttggtgtagca
aattaccatgttggagctcacattgatgaatcatgtcgcaaactgaccatgctttacaag
gttgaggccggagcatgtgatcaaagctttggaattcatgtagctgagtttgccaacttt
cctgaaagtgttgttgcactagctagggaaaaagctgcagagttggaagatttttcttct
attgcagatggggagcaacaggagcaggttggatgtaagcgcaagcgggtgtataatcct
gatgacacggtgaaaggcgctgcttgtgcacgtcaatttctgcaggaatttgcggatctt
cccctggatcgaatggacttaactgaggttcttaaaagagtgagcacattgaggtgtgat
ttagagagagatgcagcagactctccatggcttcagcagttcttttag
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