Aristolochia californica: 137936464
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Entry
137936464 CDS
T10486
Name
(RefSeq) uncharacterized protein
KO
K18734
protein SMG8
Organism
acak Aristolochia californica
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acak03019
]
137936464
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
137936464
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
137936464
NCBI-ProteinID:
XP_068637256
LinkDB
All DBs
Position
Unknown
AA seq
1197 aa
AA seq
DB search
MELPSSSPMRVLIRPSSSAITPASSSSSTTSLIPPLPQNPVSLRLSSFSPSTSSSSSSSS
SSSSSSSSSSSSSTLPSSDGVIVVGFFGRNSGDVTQLINRTLDANIFGSGNLDKKLSANI
QKVAEKEGEQEKQGKTIFSWNRNISYYHDQDRGIVYLQFSSYHFSPSEGMSLLKDGRGEM
SLDSTLDNIESEDLKGMLVMFSVCHIIIYLHEGSRFDTQILKRLRMLQAAKQALSPFVKS
HILPKLTTKASSSSFSQQTIPSTSSNSPPPSRGGSIASRHASAISLMSGSSSSPALFPGQ
CTPVILFVFLDDFSDGPSLTSRVEDLADSSLPNQSSTNSSIPKPTLSTMGSASVVMLARS
VSKSEGNFRKKLQSSLEAQIRFLIKKCRVLGGTEANHSGSRGAVQLNCPPLFCVDASRAV
ALVDRSMNSKGESLNFVSGLVEEILNNNGGPETLLLDNYYQNLNKDDIQLIKEFIYRQSE
ALRGRGSLATNTNSGSAGGVGMVAVAAAAAAASAASGKSLNAPPELPSLEDWIYCSRLFV
DSLVTRPELPDANKSYENISMTGKGAIEAAKYLLESGRGLNMKFSTSWCQRVLPMARELY
LKDLPACYPTVLHNAHLDKAMQGFRSMVKGPAVQTFAKRLEEECISIWESGRQLCDAISL
TGRPCVHQRHEVGTAKFPMEGEVKPHSSGYVFLHACACGRLRRFRDDPFDFESANVMFNC
FPNCENFLPALQLPKSCNGKPVQASSWSVVRVGGAKCYEPSRGLLMSGFCSNEKFLSSLR
IMLEKGKDLHGLHIGTAQKGSTMKPNPDSKLFFVTDEERKKALTGAENQRKASENVHSDD
QKINFGKGLPNFTLKKPFSEVVASSFASDSAFPPLQQRKQSILASEKGNKQRVLRDRVED
KVNVIDSCRKSHMNEDVSIKDNSNGVLKDIDPFVQIGSNVVPVNVNGSGEHDVSLKQVEV
YIGFEHECSYGHRFLLTPEHLDGLGSFFSHPEGSITTKVENYDEKSADFLNSNRNGLALK
VQELNHDAQSLSVKDIECSLQHVSLDDSGFAYSLLNRNLPIYMKCPHCENSRNKEMNQNI
KFASTISQLQRIFLVTPPFPVVLATCPLVQFEESCLHPSLLDQEHQSRFSIGCQVILPPE
SFLTLRLPFVYGVQLENGILQPLNHLEHQPELTAWITKGSTLQVVSKGMNTIADIHM
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggagctcccaagttcttctcccatgcgtgtcctaattcgtccttcttcttctgcaatt
accccagcgtcttcttcgtcttccactacctccttaattccccctcttcctcaaaaccct
gtgtctctccggttgtcttctttctccccttcaacttcctcttcttcctcatcatcatca
tcatcttcttcttcttcttcttcctcgtcatcttcttctactttaccctcatcggatggc
gtaattgttgttggtttctttggccgaaatagcggtgacgtgacgcaactaatcaaccga
actctcgacgctaacatatttggctccggaaatctcgacaaaaaactttctgcgaatatt
caaaaagtcgcagaaaaggaaggcgagcaggagaaacaggggaagacaattttttcttgg
aatcgcaacataagttactatcatgaccaagacagggggattgtatatttgcaattctct
tcatatcacttttctccttcggaaggaatgtcattgctcaaagatggtcgcggggagatg
tccttggattcaactttggacaatatcgagtctgaggatctcaagggaatgctagtgatg
ttctcggtctgccacattatcatatatcttcatgaaggttcccgctttgatacacaaatc
ctaaaaaggcttcgaatgctacaagcagcaaaacaagccctgtcaccatttgtgaaatct
catattttacctaagttgaccactaaagcttcttcttcatccttctctcagcaaactata
ccctcaacatcttctaacagccctcctcctagtagagggggtagcattgcaagtcgccat
gcttcggcaatttctcttatgtcaggttcaagttcatccccagctttgtttccaggccag
tgtacacctgtcattctttttgtttttcttgatgacttctcagatggcccaagtctcaca
tctcgtgtggaggatctggcagactcatcattaccaaatcagtcatcaactaacagcagc
attccaaagcccacattgtctacgatgggctctgcttctgtggttatgttagctcgttca
gtcagtaaatctgaagggaattttaggaagaaactacagtcgtcacttgaggcacagatc
cgatttttaataaagaaatgtcgtgttctaggaggaactgaagccaatcattccgggtca
agaggtgcagtccagttaaactgcccacctttgttttgtgttgatgcttcaagagctgtt
gcattggtagaccggtcaatgaacagcaaaggcgaatcacttaattttgtatcaggtctt
gtagaagagattttaaacaataatggaggccctgaaactcttctgcttgataactattat
caaaacttaaataaggatgatatccaattgattaaggagtttatttatagacagtctgag
gcattgaggggaagagggagtttggccactaatactaatagtggttcagctggtggtgtt
ggtatggtagctgttgctgcagcggcagcggcagcttcagctgcttctggtaaatcactt
aatgctccacctgaattgccaagtttggaagactggatttattgtagtcgtctttttgtt
gattcattggtgacaaggcctgaacttcctgatgcaaataaaagctatgagaacatatct
atgacaggtaaaggtgcaattgaagctgctaaatatttgttggagagtggtcgaggtcta
aacatgaaattttccacatcttggtgccaaagagttcttccaatggccagggagctttat
ttgaaagatctgcctgcttgttatccgactgtccttcacaatgcgcacctagataaagct
atgcagggattccggtctatggtgaagggccctgctgttcaaacttttgccaaaagatta
gaagaagaatgcatttctatttgggaatcagggaggcaactttgtgatgctatcagtttg
actggaagaccctgtgtgcaccagagacatgaagttggaacggccaaatttcccatggaa
ggtgaagttaagccacactctagtgggtatgtcttccttcatgcttgtgcttgtggccgc
ttgaggcgatttcgagatgatccatttgattttgagagcgctaatgttatgtttaattgt
tttcccaactgtgagaatttccttccagcacttcaacttcctaaatcctgcaatggcaaa
cctgttcaagcttcttcatggagtgtggttcgtgttggaggtgcaaagtgctatgaacct
tctagaggcttgcttatgagtggattctgctccaatgagaagttcctttcaagcttgagg
attatgcttgagaaaggaaaggacttacatggtttgcatataggtacagcccagaaagga
tctactatgaagccaaatccagattctaagcttttctttgttacagatgaagagaggaaa
aaggctctaacaggagcagaaaatcagagaaaggcttcagagaatgttcattctgatgac
caaaagattaactttggaaaaggtcttccaaacttcactttgaagaaaccattttctgaa
gttgttgcaagttcatttgcttctgattctgcattccctcctcttcagcaaaggaaacaa
tcaatactagcttcagaaaagggtaataaacaacgggttttaagagaccgggttgaggat
aaagttaatgtaattgacagctgtaggaagtctcacatgaacgaagatgtttctatcaag
gacaattcaaatggtgtcctcaaagatatagatccttttgtacagataggaagcaatgta
gttcctgtgaatgttaatggtagtggagaacatgatgtttcattgaaacaagttgaagtc
tacattggctttgagcatgagtgctcttatgggcacaggtttttattgactccagagcat
cttgatgggcttgggtctttcttttctcatcctgaaggttccattaccactaaggtggaa
aattatgacgaaaaatctgcagatttcttaaactcaaatagaaatggtttagctttgaaa
gttcaggagttaaaccatgatgcacagtctctgtctgtaaaggacattgaatgcagcctg
cagcatgtcagccttgatgatagtggttttgcatattcccttttgaatagaaacttgcca
atatatatgaagtgccctcattgtgagaactccaggaacaaggaaatgaaccaaaatatt
aagtttgccagtacaatttcacagcttcaacgaattttcctggtgacacctccctttcca
gttgtgttagccacatgccccttagtgcaatttgaggagtcttgcctacatccatcactt
ctggaccaagagcaccaatcacgcttcagtattggctgtcaagtgatcttaccacctgaa
agctttcttaccctaaggcttccttttgtctatggtgtccaattggagaacggaattcta
caaccacttaatcaccttgaacatcagccagaattaactgcctggattaccaaaggatca
actttacaagtggtctcaaaggggatgaataccattgcagacattcacatgtag
DBGET
integrated database retrieval system
