Aristolochia californica: 137936746
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Entry
137936746 CDS
T10486
Name
(GenBank) protein RDM16 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
acak Aristolochia californica
Pathway
acak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137936746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acak03041
]
137936746
Spliceosome [BR:
acak03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
137936746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
ExsD_M
Motif
Other DBs
NCBI-GeneID:
137936746
NCBI-ProteinID:
XP_068637713
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MKDREREKAREREREIERDRHRERDHKRRIRDEPLREVDDRQQGDKYRDDGSRARVYRDE
SKHERSRERESRSEIEGSRDRFRDSVERDRSYREESVERRHSSSSHKRKDRGDSEDRHDT
TEKRSRKEEKREKRRFKDQVAEESRNERVDGVKPEEKRSEVRNRDNGEPITSSKSEKNTV
DYETLDSSKNSGVTNGSRSSADGSALEPLTMAPEALTESNTASNHTLPSKVSSVTTTNEN
KGVSITRSHQVPGKSSTDGTSSSSSAGKSGSLTLDALAKAKKALQMQKELLKKNPLLNKS
STSGSEEINKEVPKAPLSLPSTTSTIPVGAATSMKPPTNTFISAALSIPNIEAVKRAQEL
AARMGFHQDPEFGPLINLFPGQSAPEVAVQQKPAKAPVLRLDALGREIDEQGNVINVPKP
TSTLKVNINKQKKEAFQILRPDLDVSLQSNPHFDDRMGINKTKLLRPKRMNFQFVEEGKW
SKQAEVIRFKSQFGEAQAKELKTKQAQLAKAKAELADLNPNLIEVSERVITKEKPKDTIP
EVEWWDLALVNSAAYPDAMEGSVEDKLKMDKITVYVEHPLPIEPPAEPAPPPPQPLKLTK
KEQKKLRTQRRLAKEKDRQEMIRQGLLEPPKPKVKMSNLMKVLGAEATQDPTRMEMEVRS
AAAEREQAHVDRNIARKLTPAERREKKERKLFDDPNNLESLVSVYKINDLSHPQTRFKVD
VNAQENRLTGCAVISDGLSVIAVEGGSKSIKRYGKLMLKRINWAAALPNEDGVEKDEDAP
LNKCVLVWQGSVAKPSFNRFLVHQCRTEAAARKVFSDAGVGHYWDLAVNFSDDQI
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatagggaaagagagaaggcaagagagagagaaagagaaattgagagagatcgc
catcgggaacgagaccataagcgtcgcatcagagatgagccgttaagagaagtagatgat
agacagcaaggcgacaaataccgggacgatggttccagagctagggtttacagagatgaa
tctaagcatgaaagatctcgggagcgggaatcgagaagcgagattgaaggaagtcgtgac
agattcagagattctgtggaaagggataggagttaccgggaggaatccgtggaaagacgg
cattcttcttcttcacataaacgaaaggatcgtggagacagtgaggatcgtcatgatacc
actgagaagcggagtaggaaggaagaaaaaagagagaaacgtaggtttaaagatcaggtg
gctgaggagtctcgtaatgagagggtagatggagttaaacccgaggagaagagaagtgaa
gttcgaaatagagataatggagaaccaattacttcttcaaaatcggagaaaaatactgtg
gattatgagacattagatagttctaaaaactctggtgttaccaatgggagtcgttccagt
gctgatggtagtgctttggaacctttaactatggcaccagaggctttgacagagtctaac
actgcatccaatcatacccttccttccaaggtatcttcagttacaaccaccaatgaaaat
aagggagttagtattaccagatctcatcaggttcctggaaaatctagtacagatgggaca
tcctcttcatcatctgctggcaaaagtggaagcttgactcttgatgccttagcgaaagct
aagaaagctttacagatgcagaaggaattgttaaaaaagaatcctctgttaaacaagtct
tccacatcaggctcggaagaaataaacaaagaagttcctaaagctccattatcacttcca
tctacaaccagcaccataccggttggggctgcaacatccatgaagcctcctaccaatacc
ttcatcagcgctgccctttcaattccaaatattgaagctgtaaagcgggcacaggaactt
gctgccaggatgggttttcaccaggacccagaatttggccctctaattaatctgtttcct
gggcaaagtgctcctgaagtggctgttcagcagaaaccagccaaggctcctgttcttcgc
cttgatgcacttggcagagaaatagatgagcagggtaatgtgatcaatgttccgaaacca
acaagcacattaaaggtcaacatcaacaaacagaagaaagaggcattccaaatactgagg
cctgacttggacgtcagtttgcagtcaaatcctcactttgatgatagaatgggtataaat
aaaacaaagcttctaaggcctaaaagaatgaactttcagtttgttgaggaaggcaaatgg
tcaaagcaggcagaagtgattagatttaagagtcaatttggtgaagcacaagctaaggag
ttaaagaccaagcaagcacagctagcgaaggcaaaggctgaactggctgatctcaaccct
aatttaatagaggtctcagaaagagtcatcaccaaagaaaagccaaaggacaccatccct
gaagttgagtggtgggacctggcacttgtaaattcagctgcctaccctgatgcaatggaa
ggtagtgttgaggataaactgaagatggataaaataaccgtttatgttgagcaccctctt
cccattgaaccgccagcagagcctgcaccaccacctccacaacctctgaagctaaccaag
aaggaacagaaaaaactaaggacacagagacgtcttgctaaggaaaaagatagacaagaa
atgatcagacaagggcttttagaacctcccaaacccaaagtgaagatgagtaatctcatg
aaagtacttggtgctgaagcaactcaagaccccacaaggatggaaatggaagttcgcagt
gcagcagctgaacgtgaacaagcccatgttgatagaaatatagctcgcaaactaacccct
gcagagcgccgagagaagaaagagaggaaactgtttgatgacccaaataatctcgagtcc
cttgtgtctgtttacaagatcaatgatctctcgcaccctcagactaggtttaaggttgat
gtgaatgcacaggagaaccggcttacagggtgtgcagtgatttcagatggacttagtgtt
atagctgtggaaggtggaagcaagtccattaagaggtacggaaagctgatgcttaaacga
atcaactgggctgctgcacttccaaacgaagatggagtggaaaaggatgaagatgcaccg
ttaaataaatgcgttcttgtgtggcaaggtagcgttgcaaagccaagcttcaacaggttt
ctggttcaccagtgtcgaactgaagctgctgcaaggaaggttttctccgatgctggggtt
ggtcactattgggacctagcagttaacttttccgatgaccaaatttag
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