KEGG   Aristolochia californica: 137937376
Entry
137937376         CDS       T10486                                 
Name
(RefSeq) uncharacterized protein
  KO
K10756  replication factor C subunit 3/5
Organism
acak  Aristolochia californica
Pathway
acak03030  DNA replication
acak03410  Base excision repair
acak03420  Nucleotide excision repair
acak03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acak00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    137937376
   03410 Base excision repair
    137937376
   03420 Nucleotide excision repair
    137937376
   03430 Mismatch repair
    137937376
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acak03032]
    137937376
   03036 Chromosome and associated proteins [BR:acak03036]
    137937376
   03400 DNA repair and recombination proteins [BR:acak03400]
    137937376
DNA replication proteins [BR:acak03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    137937376
  DNA Replication Termination Factors
   ELG1-RFC complex
    137937376
Chromosome and associated proteins [BR:acak03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    137937376
DNA repair and recombination proteins [BR:acak03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     137937376
  Check point factors
   HRAD17(Rad24)-RFC complex
    137937376
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA_lid_RFC1 Rad17 RNA12 AAA_22 DUF815 AAA_16
Other DBs
NCBI-GeneID: 137937376
NCBI-ProteinID: XP_068638543
LinkDB
Position
Unknown
AA seq 764 aa
MENSYRHSKDTHSRSSLKQRRSGYEPSDTETEWQESPWGDLNEDNRRMHGDLFFPSNRDR
NISSLSRRQRYPSNYDFSVSGNSKISNTKPEPRKTRSRSPYKPQADEDTDISPISPMRRN
ISPFAASQGRRHVSPYKSTKEEGDQDINETNFSSRKYDYRTPLKFIDAEKNGASYFPGAS
KVTERSSYCRNAVSAPRLRAKEQQITSASTPRIGHRSPSPLVRSLTQKQKEISHPKTPSG
EINEIVATAKLLQSNGRFPTHDLMTQSIESITPSDIFFSQDYMATQKKFGAKEFAPEPTV
APGRNNVAPPQTSGFRTGSENQVRAFSMSRTVPSKTNTSLSTSISRQSGGKTSQESGSFR
KFTVSRQKKLPDAWFPCVRVPCRTSKSPEHRQFGETSFIEKAFVVENLRQFWADKHQPGS
LNGFICHKQQAQQLKQLISHNNCPHILFKGPSGSGKRALCMALLHEIYGSSALKLPSSLC
SVQERLIEVVFPLTSSLHHMELNLRSDIMNAKYALMALVKEIASNHESIPEVSDASYKAD
YKVIVLHEVDNLPEPIQHLIKWIMDCYTDACKIILCCEDDTNLLESIKGRCKVIIVDAPV
AHEIMEVLIQIARKENFELPMTFAAKIATKSKQNLRKAIMALEASKAHHYPFADEQPIQL
GWEEAVVEIATEILADPSPKRLFLSRAKLQKLLVDFVQPKLILQKLVQQFLKGVDAGLKR
QLYYWHAYYDKRLPPGASALLKLEEFLAKFTSIHRRSGGFRRFS
NT seq 2295 nt   +upstreamnt  +downstreamnt
atggagaattcctacagacacagcaaggacacccactctcgttcgtctttaaaacagagg
cgaagcgggtatgagccgtcggatacggaaaccgagtggcaggagagcccatggggcgac
ttaaacgaggataatcgcagaatgcatggagatttattctttccttcaaatcgtgacaga
aatatcagttctttgagccgtagacaaaggtatccttccaactatgatttttctgtttct
ggcaatagcaagatttcaaataccaagcctgaaccgagaaagactcgaagtcgatctcct
tacaagccacaagcagatgaggatacggatatttctcctatttctccaatgcgaagaaac
atcagtcctttcgctgcatctcagggcaggagacatgtttcgccatacaagtccaccaag
gaggaaggcgaccaggacattaacgaaacaaatttctcgagcagaaaatatgactatcgc
acgccactcaagtttattgatgcggagaaaaatggcgcgtcctattttccgggagcctca
aaagtgactgagagaagtagttattgtcgaaacgcggtgtcagctccaagattgagagct
aaggaacagcaaattacttctgcctctacaccgagaataggacacaggagtccctcacca
ttggtgagaagcttaacccagaagcagaaagagatctcccaccccaagaccccatctggt
gaaatcaacgaaatagtcgcgactgccaaattacttcagtcaaatggtcgcttccccacc
catgacctgatgacacaaagcatagaatcaataacaccgagtgatattttcttctcacaa
gattacatggcgacgcaaaagaaatttggtgctaaagaatttgcgccggagccgacagtg
gctcctggaagaaataacgtagctccaccacaaacgagcggattcagaacaggttctgaa
aatcaggtacgagctttctcaatgagcaggactgtgccatcaaaaacaaatacgagcttg
agcactagtataagccggcagagtggtggaaaaaccagccaggagagtgggagtttcaga
aaattcaccgtcagtagacagaaaaaactacccgatgcatggtttccctgcgtgagggtc
ccttgcaggacctcaaaatcgcctgaacacagacagtttggtgaaacttcgttcattgaa
aaagcatttgtggtggaaaatttgagacagttttgggctgacaagcatcagccgggatct
ttgaatggtttcatttgccacaaacaacaagcacaacaactaaagcagctgatatcccac
aacaactgcccgcacattctgttcaaaggaccttcaggatcgggaaaaagagcactatgc
atggcgttactgcatgaaatctatggctcctctgctttgaaattaccaagttccttatgc
tctgtccaggaaaggcttatcgaagtggttttcccattaacttccagcctccatcatatg
gagcttaatctacggagcgacataatgaatgccaaatatgcattgatggccctcgtgaag
gaaatagccagcaaccatgaatctattcccgaagtcagtgacgctagttacaaagcagat
tacaaagtgatcgttctccatgaggttgacaacctccccgagcctattcaacacttgatt
aaatggattatggactgttatacggacgcatgcaagatcatactctgctgtgaagatgat
actaatctactcgaatctattaaaggccgctgcaaagtgattattgtggatgcccctgtt
gcacatgaaatcatggaggtgctgattcagatagcaagaaaggaaaactttgagctacct
atgacttttgctgctaaaattgcaaccaagtcgaagcagaatttaagaaaagcaattatg
gcacttgaggcatccaaagcacaccactatccatttgctgatgaacaacctattcagctt
gggtgggaagaggctgtcgtggaaatagccactgaaattctagctgatccatctcccaaa
agattgtttttatcacgagcaaagcttcaaaaattgttggtggactttgttcaaccaaaa
ctcatccttcagaaacttgtgcagcagtttctcaagggagttgatgccggcttgaaaagg
cagctctactattggcatgcttactatgacaaaaggcttccacccggagcaagtgcccta
ctcaagctggaagagtttctagcgaagttcacaagtattcacaggaggagcggtggtttt
cgtcggttctcttaa

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