Aristolochia californica: 137937732
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Entry
137937732 CDS
T10486
Name
(RefSeq) protein ALTERED SEED GERMINATION 2 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
acak
Aristolochia californica
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acak04121
]
137937732
Ubiquitin system [BR:
acak04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
137937732
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR3_2nd
ANAPC4_WD40
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
TRM82_WD
Beta-prop_HPS5
RMD1-3
Beta-prop_VPS8
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
TPR_17
Beta-prop_SCAP
Beta-prop_DCAF12
TPR_1
WDR90_beta-prop_4th
TPR_2
Beta-prop_WDR41
ANAPC3
Beta-prop_IFT140_1st
TPR_19
CNOT10_TPR
Motif
Other DBs
NCBI-GeneID:
137937732
NCBI-ProteinID:
XP_068638962
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
MASWNFSDGNINNLIENRYIDVRQDTNHRLQMHSSLIKRLSLEKELEGHQGCVNAIAWNS
KGSLLISGSDDTQVNIWSYTSKSLLHSIDSGHTANIFCTKFVPETSDELVVSGAGDAEVR
LFNLSYLHGQSTEETLEPLALFRCHSRRVKKLAVEVGNPNVVWSASEDGTLRQHDFREGS
SCPPSGSSHQECRNILLDLRLGAKKSLADPPKQCLALKSCDISTSRPHQLLVGGSDAFAR
LYDRRMLPPLTSSEKRMKPPTCVNYFCPMHLSDRGRSTLPLTHVTFSPNGEEVLVSYSGE
HVYLMDANLGSKNVLRYSVEDVSQQVNSAPTLSEMETAQDLIAKPFQCSNDSIGNCNHPT
RLHQCQELLEAAEKCLERSDYFNGIEACNELLDGRIREIGPALEYGCLCTRSALFLKRKW
KNDVHMAIRDCKKAQRIHPSSYRAYFCMAEALLELGKHKEALEYAMVAHHFAPSNYQVSE
MVENIKQHLASVEAAENNNNGLSKSESRKGKSRSSSDVNYRQEANSDASQDCPRSEREDS
DIEEEMEVDFETSISGDEGRDIESGILRGSLNLRFHRKADSAREKHSPNGSCESPSSSSQ
NENLTYEPEVVIDMKQRYVGHCNVGTDIKQASFLGQNGEYIASGSDDGRWFIWEKKTGRL
VKMLAGDEAVVNCVQCHPFDCTIATSGIDNTIKIWSPQSEVPSIVTGGTAGPETADVLSA
METNQRKLLRNREHVLPFELLERFRMHDFAEGTLHPFECAQS
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtggaatttctccgacggtaacatcaacaatttgatcgaaaacagatacata
gacgttcgccaggacaccaatcacaggttgcaaatgcattcatcattgataaagaggctt
tctcttgaaaaggaacttgagggtcatcaaggttgtgtgaatgcaatagcatggaattca
aaaggatcactcttaatatctggatcagatgacacgcaagttaacatttggagttataca
agcaagagtctgttgcatagtattgatagtggtcatactgcaaacatattctgcacaaaa
tttgttccagagacttctgacgagcttgttgtgtctggtgctggagatgcagaagttcgc
ttgttcaatttatcttatttacatgggcaaagtaccgaagaaacacttgaaccactggcc
ttgtttcgctgtcactcaagaagagtgaagaaattagctgttgaagtagggaatcctaat
gtggtgtggagtgcaagtgaagatggcaccctgcggcagcatgactttcgggagggttcc
tcttgtcctccctctgggtcttcccatcaagagtgtcgtaatattctgcttgatctgcga
ttaggggcaaagaaatctctagctgatcccccaaaacagtgtcttgctttaaaatcttgt
gacatcagtacaagtcggcctcatcagcttcttgttggtgggagtgatgcttttgctcgt
ttatatgatagaagaatgctgccgccactaacctcttctgagaagaggatgaagccacct
acatgtgttaactatttctgtccgatgcatctgtcagatcggggcagatcaactttgccc
ttgactcatgttacttttagtccaaatggagaagaggtgcttgttagttatagtggggag
catgtctacttaatggatgcaaatcttggcagcaaaaatgtcttgagatactctgtagaa
gatgtttcacagcaagtgaattcagctcctacacttagtgaaatggaaacagcccaggat
ctgatagcaaaaccttttcagtgttcaaatgatagcattggaaactgcaaccatcctacc
aggcttcaccaatgccaggaattactagaagctgctgaaaaatgtttagaacggtcagat
tattttaatggaattgaagcatgtaatgaattacttgatggcagaattcgagaaattgga
cctgcacttgagtatggttgcttatgtactcgttcagcactatttctcaagaggaaatgg
aaaaatgatgttcatatggctattagagactgcaagaaagctcaaaggattcatccttca
tcttacagagcatatttctgcatggcagaagcccttttagagttaggaaaacataaagaa
gctctagagtatgcgatggttgcacatcattttgctccatccaactaccaggtgtctgaa
atggtagagaatataaaacagcatctagcttcagttgaagctgcagaaaataataataat
ggattgtcaaaaagtgaatcaaggaagggtaaatcaagatcatcgagtgatgtaaattac
cgacaagaagcaaattctgatgcatcgcaggattgtcctcgatctgaaagggaggattca
gacattgaagaggagatggaagtggattttgaaacatccatttcaggtgatgagggacgc
gatattgaatctggtatccttcgtggaagtttgaatttgagatttcaccgtaaagctgat
tctgccagagaaaaacattcaccgaatgggtcatgcgagtcaccttcatcttcatctcaa
aacgaaaatttaacttatgagccagaagttgtgattgatatgaaacaaagatatgtgggc
cactgcaatgttgggacagacattaaacaggccagttttctgggccaaaatggagagtat
attgccagtggaagtgatgatgggagatggtttatatgggagaagaaaactggaaggcta
gtgaaaatgcttgctggagatgaagctgttgtcaactgtgttcagtgccatccttttgat
tgcaccatcgctaccagtggaattgataacacaatcaagatatggtctcctcaatcggaa
gtgccatcaatagtaactggaggaacggcgggcccagagactgcagatgtgttgagtgcg
atggaaaccaaccaacgcaaattgttgagaaaccgtgaacatgtcttgccctttgaacta
ttggagcgttttagaatgcatgactttgctgaaggaacgttacatccttttgagtgtgcc
cagagctag
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