Aristolochia californica: 137937828
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Entry
137937828 CDS
T10486
Name
(GenBank) protein ROOT INITIATION DEFECTIVE 3-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
acak Aristolochia californica
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acak03009
]
137937828
Ribosome biogenesis [BR:
acak03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
137937828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_EML_2
NBCH_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_IP5PC_F
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_VPS8
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_SPT8
BCAS3_WD40
PEP5_VPS11_N
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_Nup120_160
VPS11_N
Motif
Other DBs
NCBI-GeneID:
137937828
NCBI-ProteinID:
XP_068639104
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MTSISREILLAISPEGPITAYDAFTGNLLAQFSGIRSPPKGITLAGKSVIAASHISAATA
SGSICLYNWWSSAAFHHIPTPEPVAPLVATSDGSYLFSGGLSGHIHALSIPSGELLRSFP
AHHKPVSCLAVNDDSSLLISGGDDGSITVFPILQILDVSSVGDSVRFPLYQLRAHSSSVT
AVTTGTGGCNSTVISSSLDCTCKFWSLAHGSHLRTVRFPTVIWCVAVDITESEFYAGGAD
GRVYIGIMKVGKRQVASSDMGVVAWAPEHGGAVIAVAVANQGLNLVSASADGSIRIWDVE
TGTVVRVFGQERGSIIDLVVTKGLASKGLGNDRVILRGESSSFSSKELRRPVKEIGEMQE
WFNVVVKDRRGAIDTLEVAISTYERLLGLFLNQAKGG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatttcccgcgaaatcctcctagcaatctccccggaggggcccatcacagct
tacgatgctttcacgggcaacctactggcgcagttttctgggattcgatccccgccgaag
ggtattacactcgccggaaaaagcgtcattgcagcctcccatatctctgctgctacggcc
tccggctctatttgtctctacaactggtggtcttccgctgccttccaccacatacccacc
cccgaaccagtagcaccacttgttgccacatccgatggttcatatctcttctctggcgga
ttgtccggccatatccatgctctctcaattccttcaggggaacttctccgttcgttccct
gcccatcataaacccgtctcctgcttagctgttaacgacgacagctctcttctgatatca
ggtggggatgatgggtccatcactgtattccctatcctccaaatattagacgtgtcttca
gtgggtgattctgtgcgattcccattgtaccaactccgagcccatagttcatcggtgacc
gccgtcactactggcaccggtggatgtaattcaacagtaatttcaagctcgttggactgc
acctgcaaattttggagccttgctcatggcagccatcttcgtaccgttcgatttcccact
gtgatctggtgtgtagctgttgatatcactgagtcggagttttatgcaggtggggcagat
gggcgggtgtacattgggataatgaaggttggcaaaagacaagtagctagcagcgatatg
ggagtggtagcatgggctccagagcacggtggagctgtgatagcggtagcggtggcaaac
caaggcctcaacctggtctcagcctctgcagatgggagcattaggatttgggatgtagag
actggcactgtggtcagagtttttggacaagaaaggggaagcatcattgatcttgtggtc
acaaaaggcttagctagcaaaggccttggaaatgatagagttatactccgcggtgagagc
tccagtttttctagtaaggagctacggaggcctgtgaaggagataggagagatgcaggag
tggtttaatgtggtggtgaaggataggaggggagcaattgatactctagaagtggcaatc
agcacatatgagagactgttggggctgtttctgaaccaagccaagggggggtag
DBGET
integrated database retrieval system
