Aristolochia californica: 137938451
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Entry
137938451 CDS
T10486
Name
(GenBank) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
acak Aristolochia californica
Pathway
acak04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
137938451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acak04121
]
137938451
Ubiquitin system [BR:
acak04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
137938451
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_6
LRR_4
F-box-like
Motif
Other DBs
NCBI-GeneID:
137938451
NCBI-ProteinID:
XP_068639513
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MDPKRGKSLTQEQEGKHVSSFPDEVLERVLLSIKSHKDRSSVSLVCKDWFNAERWSRTRV
FIGNCYSVSPEILIRRFPNIKSVTLKGKPRFSDFNLVPPNWGADIHSWLTAFASAYPFLE
ELRLKRMTIRDDSLEFLAQKFVNFRALSLVSCDGFSTEGLAAIATYCRNLTELDIQENGI
EDLGGSWLNCFPDYFTSLEVLNFANLSSEVNFDALERLVARCKSLKVLKVNKNVSLEQSQ
RLLLRGPQLIELGTGSFSQEFTLRQYAELETAFNNCRKLHTLSGLWEVTSMYLPALYPAC
ANLTFLNLSYACLQSAELAKLLPNCPHLQRLWVLDTVEDKGLEAVGSSCPLLEELRVFPA
DPFDQDAAFGGGGGVTEEGFVAVSRGCPKLRYTLYFCRQMTNAAVETVARNCPNFTHFRL
CIMNPCEPDYTTNQPMDEAFGAVVKICTKLQRLAVSGLLTDKTFEYIGKYAKNLETLSLA
FAGNSDRGMQYVLEGCPKLRKLEIRDCPFGNAALLSGLERYESMRSLWMSACNVTMSACS
LLAREMPRLNVEVIREDENDDNQAEKVYVYRSIAGRRRDAPNFVLTL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggacccaaaaaggggaaagagtttaactcaagaacaagagggaaaacatgtctcttcc
ttcccggacgaggttttggagcgagttttgctttccatcaaatcacacaaagaccggagc
tctgtctcactcgtatgcaaagactggtttaacgcggagcggtggagccgtactcgcgtt
ttcatcggaaattgttactctgtctctccggaaatcctaatccgccggttccccaacatc
aaaagtgttacgctgaagggaaagcctcgattttctgatttcaatctggtcccaccgaac
tggggggccgacattcattcatggcttactgccttcgcttctgcttacccttttcttgag
gagctgcggcttaagagaatgacgattagagatgacagcttagagtttttggctcagaag
tttgtcaatttcagagctctgtcactcgttagctgtgatgggttcagtactgaaggtcta
gcggccattgctacttactgcaggaacttgaccgagcttgacattcaggagaatgggatt
gaggaccttggaggcagttggctgaattgctttcctgattatttcacatctttggaagtt
cttaactttgcaaatttgagcagtgaagtaaactttgatgccctggagaggcttgtggcc
aggtgcaagtctctcaaggtcctgaaagtaaacaagaatgtttctctggagcagtcacag
aggcttcttttgcgaggtcctcagctaatagagcttggaactggctcattctctcaggaa
ttcactcttcggcagtatgcagagcttgagactgcatttaacaactgtaggaaactgcat
accctttcagggttatgggaagtcacatctatgtatcttcctgctctatatcctgcttgt
gcaaacctgactttcttaaatttgagctatgcatgcctgcaaagtgctgaactggctaag
ctattgccaaattgccctcatcttcaacgcctttgggttctggatacagttgaagacaaa
ggattggaggccgtggggagtagctgcccgttgctcgaagagctgcgtgtcttccctgct
gacccatttgatcaagatgctgcctttggtggtgggggtggggtgacagaagaggggttt
gtggcagtctctcgtggctgtccgaagctccgttatactctctacttctgccggcagatg
accaatgccgcagtcgaaacagttgctagaaattgtcccaatttcacccactttcgtctc
tgcatcatgaacccctgtgagcccgactacacgaccaaccagccgatggatgaagccttc
ggtgctgttgtaaagatctgcacgaagctccaaagactagctgtttcagggcttttaact
gacaaaacattcgagtacatcggcaaatatgccaagaacctggagacgttgtctttggct
tttgctggtaactctgatagggggatgcagtacgtgcttgagggttgcccaaagcttagg
aagctggagatcagggactgtccgtttggaaacgcggctctgctatcggggctggagagg
tatgaatccatgaggtcactctggatgtcggcctgcaatgtcaccatgagtgcctgtagc
cttctggccagagagatgccaagactaaacgtggaggtgataagggaggacgagaatgat
gataatcaggctgagaaggtttatgtttatcgttcgattgcaggccgaagaagagatgcc
cccaacttcgttctcaccctctga
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