Aristolochia californica: 137938649
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Entry
137938649 CDS
T10486
Name
(GenBank) histone-binding protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
acak Aristolochia californica
Pathway
acak03082
ATP-dependent chromatin remodeling
acak03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137938649
03083 Polycomb repressive complex
137938649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acak03036
]
137938649
Chromosome and associated proteins [BR:
acak03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
137938649
Histone modification proteins
HAT complexes
HATB complex
137938649
HDAC complexes
Sin3A-HDAC complex
137938649
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
137938649
PRC2.2
137938649
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
137938649
Heterochromatin formation proteins
Other heterochromatin formation proteins
137938649
Chromatin remodeling factors
NuRD complex
137938649
NuRF complex
137938649
NuRF complex (fruit fly)
137938649
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
MIOS_WD40
WD40_RFWD3
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_1st
Beta-prop_SPT8
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
RMC1_N
Motif
Other DBs
NCBI-GeneID:
137938649
NCBI-ProteinID:
XP_068639722
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MGDEGDSDMAQLDEEFKVWKTNSPYLYDLVISHALEWPSLTVEWLPQPPQPVPPFSFHNI
VLGTHTSNGVPNFLMVAAVAAPLAGVTNTLSDPTQPPAAIPKILITQLIPHDGEVNRARY
MPQNPAVIATKTRTSDVYVFDCSKQPKQPEGGICICNPDLKLKGHEREGYGLSWSPLKEG
YLLSGSDDSKICLWDVHAPSENKITGAMEVYEVHEDVVEDVAWHLSNENLFGSVSDDRKL
MIWDLRSSEAKKPQQAIIAHEKNVNSLSFNPFNEWALATGSSDTTVNLFDLRKLTSPLHT
FASHTDEVFQVEWNPLQETALASSAADRRVMVWDLNKIGDEQTPEDAEDGPPELLFVHGG
HTAKISEFSWNRNEPWTVASVAEDNILQVWQMAESIYRDDH
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgaaggggattcagacatggcccagctagacgaggagttcaaagtgtggaag
acaaacagcccatatctgtatgacctggtgatttcacacgccctagaatggccgtcactt
acagtcgagtggcttcctcagcctccacaacccgtcccacctttctccttccacaacatt
gttctcggaacccacacctccaatggcgttcctaacttcctcatggttgccgctgtcgcc
gctcctctcgctggagttaccaacacactctccgatcccacacagccccctgccgcaata
ccgaagattctaataacccagttgataccgcatgacggggaggtgaacagggcacggtat
atgccccaaaatcctgcagtgattgcgacgaagacccgcacctcggatgtctatgttttc
gattgcagtaagcagccaaagcaaccggaagggggtatttgcatttgtaatccggatttg
aaattgaagggtcacgagagagagggttatggtttgtcctggagcccgctcaaggaaggg
tacttgttgagcggttccgatgattcaaaaatttgcttatgggacgttcatgctccctct
gagaataagattacaggggctatggaagtatacgaggttcatgaggatgtggttgaagat
gtggcttggcatttgagtaatgaaaatttatttgggtctgtcagtgatgatcggaaatta
atgatatgggacttacgctcatctgaggccaaaaagccacaacaagctattatagcacat
gagaaaaatgtaaattctttatctttcaacccattcaatgaatgggcattggccacaggg
tcttcagacacaactgttaatttgtttgacttgagaaagcttacatctccattgcatact
tttgccagtcacacagatgaggtcttccaggtagagtggaatccacttcaggaaactgca
ttggcttcctctgcagctgatcgtagggttatggtttgggaccttaacaagatcggtgat
gagcagacacctgaagatgcggaggatggccctcctgaacttctgtttgttcatggagga
catactgccaagatatctgagttttcttggaacagaaatgaaccatggactgtagcaagt
gtagctgaggataatatacttcaggtctggcagatggccgagagcatatatcgggacgat
cactga
DBGET
integrated database retrieval system
